RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ADSSP30520 456 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 CHKAP35790 457 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ARL2P36404 184 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 GEMP55040 296 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 LAMB3Q13751 1172 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 RNF219Q5W0B1 726 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ALLCQ8N6M5 410 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 CCDC134Q9H6E4 229 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 RHBDL2Q9NX52 303 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 PRKAG2Q9UGJ0 569 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 AJAP1Q9UKB5 411 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 MAFBQ9Y5Q3 323 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 hCG_1818297A0A087WSY0 165 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 SRRM3A6NNA2 597 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 F8W8V4 182 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 BGNP21810 368 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ICAM3P32942 547 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ZBTB41Q5SVQ8 909 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 LRRC8EQ6NSJ5 796 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 MIB1Q86YT6 1006 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 SNRNP27Q8WVK2 155 aaKnown RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 PWWP2AQ96N64 755 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 DDX50Q9BQ39 737 aaKnown RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 KCNK1O00180 336 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 PEX10O60683 326 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 UPP2O95045 317 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 GHRP10912 638 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ENO3P13929 434 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ARF4P18085 180 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 IL10P22301 178 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 RPL22P35268 128 aaKnown RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ETFBP38117 255 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 MGAT5Q09328 741 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 PLEKHA7Q6IQ23 1121 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 MTDHQ86UE4 582 aaKnown RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 GALNT4Q8N4A0 578 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 SH3TC2Q8TF17 1288 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 SCHIP1Q9P0W5 487 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 NOCTQ9UK39 431 aaKnown RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 DSEQ9UL01 958 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 B4GALT4O60513 344 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 TMED10P49755 219 aaKnown RBP14.75□□□□□ -0.05
COL20A1-206ENST00000479501 ARHGDIAP52565 204 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 PDAP1Q13442 181 aaKnown RBP14.75□□□□□ -0.05
COL20A1-206ENST00000479501 FUKQ8N0W3 1084 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
COL20A1-206ENST00000479501 NCLNQ969V3 563 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 RPRD1AQ96P16 312 aaPredicted RBP14.75□□□□□ -0.05
COL20A1-206ENST00000479501 EGFL8Q99944 293 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 FHDC1Q9C0D6 1143 aaPredicted RBP14.75□□□□□ -0.05
COL20A1-206ENST00000479501 ABCF3Q9NUQ8 709 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 AURKCQ9UQB9 309 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 COQ4Q9Y3A0 265 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 NDUFS3O75489 264 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 USP2O75604 605 aaPredicted RBP14.75□□□□□ -0.05
COL20A1-206ENST00000479501 TOMM70O94826 608 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 POMCP01189 267 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 ITGAVP06756 1048 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 MAP4P27816 1152 aaKnown RBP14.75□□□□□ -0.05
COL20A1-206ENST00000479501 SNX17Q15036 470 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 SLC44A4Q53GD3 710 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 SGF29Q96ES7 293 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 TCRBV7S2A1N4TA0A589 114 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 DHX15O43143 795 aaKnown RBP14.75□□□□□ -0.05
COL20A1-206ENST00000479501 NEK2P51955 445 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 FAM183BPQ6ZVS7 135 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 ATP6V0D2Q8N8Y2 350 aa14.75□□□□□ -0.05
COL20A1-206ENST00000479501 ZC3H4Q9UPT8 1303 aaKnown RBP14.75□□□□□ -0.05
COL20A1-206ENST00000479501 AIM2O14862 343 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 FSBPO95073 299 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 APOA4P06727 396 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 POTEAQ6S8J7 498 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 STRA8Q7Z7C7 330 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 CDC26Q8NHZ8 85 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 ADAM32Q8TC27 787 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 PPP1R13LQ8WUF5 828 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 APBB2Q92870 758 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 MTG1Q9BT17 334 aaPredicted RBP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 MAF1Q9H063 256 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 ILKAPQ9H0C8 392 aaPredicted RBP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 ZC4H2Q9NQZ6 224 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 NDFIP2Q9NV92 336 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 RRN3Q9NYV6 651 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 NR2E1Q9Y466 385 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 ZNF541Q9H0D2 1346 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 SNUPNO95149 360 aaKnown RBP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 AKR1A1P14550 325 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 FAAP100Q0VG06 881 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 OVOS1Q6IE37 1185 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 ELMOD1Q8N336 334 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 ZC3H15Q8WU90 426 aaKnown RBP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 RNF157Q96PX1 679 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 UBP1Q9NZI7 540 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 BTBD7Q9P203 1132 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 TSR3Q9UJK0 312 aaKnown RBP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 UMODL1Q5DID0 1318 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 SPDYE5A6NIY4 337 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 TRUB2O95900 331 aaKnown RBP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 BEX3Q00994 111 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms