RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ANO4Q32M45 955 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 TDRD12Q587J7 1177 aaKnown RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 DCAF6Q58WW2 860 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 FAM102AQ5T9C2 384 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 NAIF1Q69YI7 327 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 ASTLQ6HA08 431 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 TPGS1Q6ZTW0 290 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 TAC4Q86UU9 113 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 XYLT1Q86Y38 959 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 DENND1CQ8IV53 801 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 ZNF276Q8N554 614 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 ZNF397Q8NF99 534 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 PJA1Q8NG27 643 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 DQX1Q8TE96 717 aaKnown RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 FAM3CQ92520 227 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 C18orf8Q96DM3 657 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 PCDHB18PQ96TA0 734 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 TRIM62Q9BVG3 475 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 NUP58Q9BVL2 599 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 TRIM5Q9C035 493 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 HAUS4Q9H6D7 363 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 C8orf33Q9H7E9 229 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 FAM204AQ9H8W3 233 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 LTB4R2Q9NPC1 389 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 TBC1D14Q9P2M4 693 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 MYO18AQ92614 2054 aaKnown RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 A0A1W2PQJ5 194 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 FAM170BA6NMN3 283 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TMCO5BA8MYB1 307 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 MAN2B1O00754 1011 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 PI15O43692 258 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 MOCS2O96007 188 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 ADH1CP00326 375 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 ADH5P11766 374 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 SKILP12757 684 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 AOC1P19801 751 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TARSP26639 723 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 CASP14P31944 242 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 GJA4P35212 333 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 HARS2P49590 506 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 PITX1P78337 314 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 SLC6A3Q01959 620 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 CENPCQ03188 943 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 NR1H3Q13133 447 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 DHCR24Q15392 516 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 FIGNQ5HY92 759 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 EFHC1Q5JVL4 640 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 LY6G5CQ5SRR4 150 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 SYPL2Q5VXT5 272 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 SPECC1LQ69YQ0 1117 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 MSANTD2Q6P1R3 559 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TRIM72Q6ZMU5 477 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 IRF2BP2Q7Z5L9 587 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 RALGPS2Q86X27 583 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 GAS2L3Q86XJ1 694 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 DEFB106AQ8N104 65 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TMEM105Q8N8V8 129 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 PLD4Q96BZ4 506 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 METTL5Q9NRN9 209 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 MRPS17Q9Y2R5 130 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 LUC7L2Q9Y383 392 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 SIT1Q9Y3P8 196 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 FARP1Q9Y4F1 1045 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.19□□□□□ -1.264e-6■■□□□ 13.9
BRCA1-215ENST00000478531 ITIH6Q6UXX5 1313 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 SHISA7A6NL88 538 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 NEDD8-MDP1E9PL57 170 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TRDMT1O14717 391 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 AP5Z1O43299 807 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 GREM1O60565 184 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 DAB1O75553 588 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 GJB6O95452 261 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TRUB2O95900 331 aaKnown RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 KLKB1P03952 638 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 CYP1A1P04798 512 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TPM1P09493 284 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 GLULP15104 373 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TNFAIP3P21580 790 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 GABRB2P47870 512 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 NUBP1P53384 320 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TBX4P57082 545 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 ZBED6P86452 979 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 KDSRQ06136 332 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 NME3Q13232 169 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 Q6ZNB5 142 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 HTR3DQ70Z44 454 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 SLC26A9Q7LBE3 791 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 ZNF571Q7Z3V5 609 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-215ENST00000478531 TMC6Q7Z403 805 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 BMP8AQ7Z5Y6 402 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 DNAAF5Q86Y56 855 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 ZDHHC17Q8IUH5 632 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 VSTM4Q8IW00 320 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 CCDC105Q8IYK2 499 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 ADGRG2Q8IZP9 1017 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 NAT16Q8N8M0 369 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 OTUB2Q96DC9 234 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 IQCDQ96DY2 449 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 CHFRQ96EP1 664 aa7.19□□□□□ -1.26
BRCA1-215ENST00000478531 MSANTD3Q96H12 275 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms