RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 M0QYT0 321 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 OLFM2O95897 454 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 TRUB2O95900 331 aaKnown RBP16.88■□□□□ 0.29
VHL-203ENST00000477538 MBL2P11226 248 aaPredicted RBP16.88■□□□□ 0.29
VHL-203ENST00000477538 HDCP19113 662 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 TFE3P19532 575 aaPredicted RBP16.88■□□□□ 0.29
VHL-203ENST00000477538 SMAD4Q13485 552 aaKnown RBP16.88■□□□□ 0.29
VHL-203ENST00000477538 PIGHQ14442 188 aaPredicted RBP16.88■□□□□ 0.29
VHL-203ENST00000477538 MESDQ14696 234 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 CBX2Q14781 532 aaPredicted RBP16.88■□□□□ 0.29
VHL-203ENST00000477538 IFI16Q16666 785 aaKnown RBP16.88■□□□□ 0.29
VHL-203ENST00000477538 OTUD1Q5VV17 481 aaPredicted RBP16.88■□□□□ 0.29
VHL-203ENST00000477538 MIB1Q86YT6 1006 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 RNF10Q8N5U6 811 aaKnown RBP16.88■□□□□ 0.29
VHL-203ENST00000477538 TPCN2Q8NHX9 752 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 KIAA1524Q8TCG1 905 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 SUSD6Q92537 303 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 SERPINB11Q96P15 392 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 CYP2S1Q96SQ9 504 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 SLC46A2Q9BY10 475 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 ADAM33Q9BZ11 813 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 POMKQ9H5K3 350 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 DDIT4Q9NX09 232 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 PAXBP1Q9Y5B6 917 aa16.88■□□□□ 0.29
VHL-203ENST00000477538 SYNJ2BP-COX16A0A087WUM0 186 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 GOLGA6L9A6NEM1 432 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 GRXCR2A6NFK2 248 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 TMEM110-MUSTN1A8MSY1 372 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 IRAK2O43187 625 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 MSI1O43347 362 aaKnown RBP16.87■□□□□ 0.29
VHL-203ENST00000477538 MOCS3O95396 460 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 IGLV3-25P01717 112 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 CKMP06732 381 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 GBP1P32455 592 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 DEUP1Q05D60 604 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 NME3Q13232 169 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 STRADAQ7RTN6 431 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 NPAS3Q8IXF0 933 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 NIPA2Q8N8Q9 360 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 FAM172AQ8WUF8 416 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 CENPIQ92674 756 aaPredicted RBP16.87■□□□□ 0.29
VHL-203ENST00000477538 FGF13Q92913 245 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 PGAP3Q96FM1 320 aaPredicted RBP16.87■□□□□ 0.29
VHL-203ENST00000477538 COX16Q9P0S2 106 aa16.87■□□□□ 0.29
VHL-203ENST00000477538 SLC12A8A0AV02 714 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 MBTPS2O43462 519 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 BUB1BO60566 1050 aaPredicted RBP16.86■□□□□ 0.29
VHL-203ENST00000477538 RNF8O76064 485 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 PROSCO94903 275 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 F9P00740 461 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 MAN1A1P33908 653 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 RDXP35241 583 aaKnown RBP16.86■□□□□ 0.29
VHL-203ENST00000477538 AVPR1AP37288 418 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 SLC7A9P82251 487 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 NNTQ13423 1086 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 ACAP1Q15027 740 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 RAB6CQ53S08 254 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 SH3PXD2AQ5TCZ1 1133 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 BNIPLQ7Z465 357 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 CMTM8Q8IZV2 173 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 C17orf53Q8N3J3 647 aaPredicted RBP16.86■□□□□ 0.29
VHL-203ENST00000477538 ZSWIM3Q96MP5 696 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 RAB6CQ9H0N0 254 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 KCND1Q9NSA2 647 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 PIGVQ9NUD9 493 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.86■□□□□ 0.29
VHL-203ENST00000477538 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.86■□□□□ 0.29
VHL-203ENST00000477538 CALCOCO1Q9P1Z2 691 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 CDH7Q9ULB5 785 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 USTQ9Y2C2 406 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 HBS1LQ9Y450 684 aaKnown RBP16.86■□□□□ 0.29
VHL-203ENST00000477538 CPQQ9Y646 472 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 CAPN6Q9Y6Q1 641 aa16.86■□□□□ 0.29
VHL-203ENST00000477538 GRID2IPA4D2P6 1211 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 ENDOD1O94919 500 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 KPNA1P52294 538 aaPredicted RBP16.85■□□□□ 0.29
VHL-203ENST00000477538 HDAC4P56524 1084 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 TBX4P57082 545 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 COG7P83436 770 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 TRIP4Q15650 581 aaPredicted RBP16.85■□□□□ 0.29
VHL-203ENST00000477538 LEXMQ3ZCV2 418 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 C11orf63Q6NUN7 778 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 POTEHQ6S545 545 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 SND1Q7KZF4 910 aaKnown RBP eCLIP16.85■□□□□ 0.29
VHL-203ENST00000477538 DAAM2Q86T65 1068 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.85■□□□□ 0.29
VHL-203ENST00000477538 ZSCAN18Q8TBC5 510 aaPredicted RBP16.85■□□□□ 0.29
VHL-203ENST00000477538 KLF16Q9BXK1 252 aaPredicted RBP16.85■□□□□ 0.29
VHL-203ENST00000477538 GOLPH3Q9H4A6 298 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 SMPD4Q9NXE4 827 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 GDE1Q9NZC3 331 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 TLR6Q9Y2C9 796 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 MIA3Q5JRA6 1907 aa16.85■□□□□ 0.29
VHL-203ENST00000477538 TCF20Q9UGU0 1960 aaKnown RBP16.85■□□□□ 0.29
VHL-203ENST00000477538 PALMO75781 387 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 HMBSP08397 361 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 GBP2P32456 591 aaPredicted RBP16.84■□□□□ 0.29
VHL-203ENST00000477538 ATXN1P54253 815 aaKnown RBP16.84■□□□□ 0.29
VHL-203ENST00000477538 EIF4EBP2Q13542 120 aaPredicted RBP16.84■□□□□ 0.29
VHL-203ENST00000477538 DAB2IPQ5VWQ8 1189 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms