RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ADGRA3Q8IWK6 1321 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 MYH8P13535 1937 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 MAGEB16A2A368 324 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 DCDC2CA8MYV0 355 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 H2AFYO75367 372 aaKnown RBP15.08■□□□□ 0
HDAC6-220ENST00000477528 GJC2Q5T442 439 aaPredicted RBP15.08■□□□□ 0
HDAC6-220ENST00000477528 TRABD2AQ86V40 505 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 LRRC52Q8N7C0 313 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 PPTC7Q8NI37 304 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 CPXM1Q96SM3 734 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 ZDHHC18Q9NUE0 388 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 WDR27A2RRH5 827 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 CILPO75339 1184 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 HMBSP08397 361 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 MMRN1Q13201 1228 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 PDK4Q16654 411 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 TIGD7Q6NT04 549 aaPredicted RBP15.08■□□□□ 0
HDAC6-220ENST00000477528 POTEAQ6S8J7 498 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 C16orf89Q6UX73 402 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 SUGP1Q8IWZ8 645 aaKnown RBP15.08■□□□□ 0
HDAC6-220ENST00000477528 TEX9Q8N6V9 391 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 ANKRD52Q8NB46 1076 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 ZNF516Q92618 1163 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 MYLK2Q9H1R3 596 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 SUDS3Q9H7L9 328 aaPredicted RBP15.08■□□□□ 0
HDAC6-220ENST00000477528 ABI2Q9NYB9 513 aaPredicted RBP15.08■□□□□ 0
HDAC6-220ENST00000477528 BAG5Q9UL15 447 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 DNAJC16Q9Y2G8 782 aa15.08■□□□□ 0
HDAC6-220ENST00000477528 E5RI56 91 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 F8W8V4 182 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 VNN1O95497 513 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 RALBP11234 206 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 GP5P40197 560 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 CDK16Q00536 496 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 SNX17Q15036 470 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 RNF43Q68DV7 783 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 ICA1LQ8NDH6 482 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 NRDE2Q9H7Z3 1164 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 POPDC2Q9HBU9 364 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.07■□□□□ 0
HDAC6-220ENST00000477528 ANP32DO95626 131 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 NOS2P35228 1153 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 CDKN2BP42772 138 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 ERFP50548 548 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 QPCTQ16769 361 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 XYLT1Q86Y38 959 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 PLEKHO2Q8TD55 490 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 NFKBIEO00221 500 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 YY1P25490 414 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 PPM1FP49593 454 aaPredicted RBP15.07■□□□□ 0
HDAC6-220ENST00000477528 FCGRTP55899 365 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 MPP3Q13368 585 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 CAPRIN2Q6IMN6 1127 aaKnown RBP15.07■□□□□ 0
HDAC6-220ENST00000477528 ZDHHC24Q6UX98 284 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 GCNAQ96QF7 691 aa15.07■□□□□ 0
HDAC6-220ENST00000477528 LBHD1Q9BQE6 289 aaPredicted RBP15.07■□□□□ 0
HDAC6-220ENST00000477528 IARS2Q9NSE4 1012 aaKnown RBP15.07■□□□□ 0
HDAC6-220ENST00000477528 TIMM13Q9Y5L4 95 aaPredicted RBP15.07■□□□□ 0
HDAC6-220ENST00000477528 LRCH4O75427 683 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 CPA3P15088 417 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 MGAT1P26572 445 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 KLC1Q07866 573 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 SREBF2Q12772 1141 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 RARS2Q5T160 578 aaKnown RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 LCLAT1Q6UWP7 414 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 PIP4K2CQ8TBX8 421 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 APOL2Q9BQE5 337 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 CEP41Q9BYV8 373 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 TRHDEQ9UKU6 1024 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 DERAQ9Y315 318 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 L3MBTL1Q9Y468 752 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 HES2Q9Y543 173 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 CNTNAP2Q9UHC6 1331 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 LOC100653049A0A140TA62 436 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 CASTOR2A6NHX0 329 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 BANF1O75531 89 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 KRT34O76011 436 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 GFAPP14136 432 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 VHLP40337 213 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 RPL10AP62906 217 aaKnown RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 NAB1Q13506 487 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 PAN2Q504Q3 1202 aaKnown RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 UNC45BQ8IWX7 931 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 ATP6V0D2Q8N8Y2 350 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 C1orf127Q8N9H9 656 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 ZC3H15Q8WU90 426 aaKnown RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 SMARCD1Q96GM5 515 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 TSC22D3Q99576 134 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 DDX50Q9BQ39 737 aaKnown RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 DCLRE1BQ9H816 532 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 TUBGCP6Q96RT7 1819 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 POLE2P56282 527 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 NBPF20Q3BBV1 942 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 SLC39A4Q6P5W5 647 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 C12orf29Q8N999 325 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 SPDL1Q96EA4 605 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 ZBTB18Q99592 522 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 SEPT5Q99719 369 aaPredicted RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 MTG1Q9BT17 334 aaPredicted RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 LRRC4CQ9HCJ2 640 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms