RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 GPS1Q13098 491 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 SURF1Q15526 300 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 HIF1AQ16665 826 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 FAM47CQ5HY64 1035 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 FNBP1LQ5T0N5 605 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 DAB2IPQ5VWQ8 1189 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 SCARA3Q6AZY7 606 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 OR52E8Q6IFG1 317 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 SPOPLQ6IQ16 392 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 IRGCQ6NXR0 463 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 LVRNQ6Q4G3 990 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 SLC43A3Q8NBI5 491 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 TMEM35BQ8NCS4 154 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 MCUQ8NE86 351 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 OR6Y1Q8NGX8 325 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 LRRC8CQ8TDW0 803 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 NSUN6Q8TEA1 469 aaKnown RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 NCSTNQ92542 709 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 CLP1Q92989 425 aaKnown RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 AZIN2Q96A70 460 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 CEP170P1Q96L14 293 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 ALPK3Q96L96 1907 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 MTG1Q9BT17 334 aaPredicted RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 BCO2Q9BYV7 579 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 C1orf21Q9H246 121 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 USP29Q9HBJ7 922 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 MLXIPLQ9NP71 852 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 DNAJC17Q9NVM6 304 aaKnown RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 DNAAF2Q9NVR5 837 aaKnown RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 ZDHHC7Q9NXF8 308 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 TAS2R1Q9NYW7 299 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 ZFATQ9P243 1243 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 WDR35Q9P2L0 1181 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 TBK1Q9UHD2 729 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 HAO1Q9UJM8 370 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 CPSF3Q9UKF6 684 aaKnown RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 PLA2G4CQ9UP65 541 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 TELO2Q9Y4R8 837 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 PCDHB4Q9Y5E5 795 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 TCRBV7S3A2A0A539 114 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 RBM47A0AV96 593 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 A8MXQ7 604 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 TRDMT1O14717 391 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 CHADO15335 359 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 AHCYL1O43865 530 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 SPAG7O75391 227 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 MAFO75444 373 aaPredicted RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 DKK1O94907 266 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 STAU1O95793 577 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 CD4P01730 458 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 PFKMP08237 780 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 KRT7P08729 469 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 RPSAP08865 295 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 TXNP10599 105 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 FOSL2P15408 326 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 CSF2RAP15509 400 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 KRT4P19013 534 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 CA4P22748 312 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 TARSP26639 723 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 EPHB2P29323 1055 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 PHBP35232 272 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 PIK3CAP42336 1068 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ASPAP45381 313 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 PTDSS1P48651 473 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 CLCN2P51788 898 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 GDF10P55107 478 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ARL4CP56559 192 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ACTR2P61160 394 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 PURAQ00577 322 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 PRKCEQ02156 737 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 BTKQ06187 659 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 PDIA2Q13087 525 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 HNRNPDQ14103 355 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 TFDP1Q14186 410 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 DPYSL3Q14195 570 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 EMC2Q15006 297 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 NOMO1Q15155 1222 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 RAB30Q15771 203 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 STXBP2Q15833 593 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 PTPN20Q4JDL3 420 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 KHDC1Q4VXA5 237 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 TEX44Q53QW1 395 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 TAF1BQ53T94 588 aaPredicted RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 C2CD6Q53TS8 623 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ACSBG2Q5FVE4 666 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ZBTB41Q5SVQ8 909 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ARHGEF16Q5VV41 709 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 CAPRIN2Q6IMN6 1127 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 TMEM270Q6UE05 265 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 DSTYKQ6XUX3 929 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 KYAT3Q6YP21 454 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 FAM47EQ6ZV65 393 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 LONP2Q86WA8 852 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 RFWD2Q8NHY2 731 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ACTL9Q8TC94 416 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 TCP10LQ8TDR4 215 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ZNF483Q8TF39 744 aaPredicted RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 AFG1LQ8WV93 481 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 NRG4Q8WWG1 115 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 STON2Q8WXE9 905 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms