RNA–Protein interactions for RNA: ENST00000475927.5

SERF2-215, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-215	ENST00000475927	SPHK2	Q9NRA0	654 aa		13.64	□□□□□ -0.23
SERF2-215	ENST00000475927	MARK1	Q9P0L2	795 aa		13.64	□□□□□ -0.23
SERF2-215	ENST00000475927	DEC1	Q9P2X7	70 aa		13.64	□□□□□ -0.23
SERF2-215	ENST00000475927	FBXO4	Q9UKT5	387 aa		13.64	□□□□□ -0.23
SERF2-215	ENST00000475927	TLR6	Q9Y2C9	796 aa		13.64	□□□□□ -0.23
SERF2-215	ENST00000475927	WNT6	Q9Y6F9	365 aa		13.64	□□□□□ -0.23
SERF2-215	ENST00000475927	SLC12A8	A0AV02	714 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	NPC1	O15118	1278 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	HOXC11	O43248	304 aa	Predicted RBP	13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	STC2	O76061	302 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	GFPT2	O94808	682 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	NOS2	P35228	1153 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	GRIA2	P42262	883 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	TNFRSF4	P43489	277 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	GALK1	P51570	392 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	ZNF528	Q3MIS6	628 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	SFMBT2	Q5VUG0	894 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	CWF19L1	Q69YN2	538 aa	Known RBP	13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	SLC26A9	Q7LBE3	791 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	C1orf210	Q8IVY1	113 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	CCDC105	Q8IYK2	499 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	SPEM1	Q8N4L4	309 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	DDX1	Q92499	740 aa	Known RBP	13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	PNKP	Q96T60	521 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	RASAL2	Q9UJF2	1139 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	STOML2	Q9UJZ1	356 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	STAP1	Q9ULZ2	295 aa		13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	LUC7L2	Q9Y383	392 aa	Known RBP	13.63	□□□□□ -0.23
SERF2-215	ENST00000475927	ANAPC1	Q9H1A4	1944 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	PATJ	Q8NI35	1801 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	TYW5	A2RUC4	315 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	ANKRD62	A6NC57	917 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927		E5RJQ4	531 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	TEX33	O43247	280 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	PAPSS1	O43252	624 aa	Predicted RBP	13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	LAMTOR5	O43504	91 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	CYP1A1	P04798	512 aa	Predicted RBP	13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	CALB1	P05937	261 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	CHRNB1	P11230	501 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	ADH5	P11766	374 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	GZMA	P12544	262 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	TNFAIP3	P21580	790 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	HOXA6	P31267	233 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	NSF	P46459	744 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	CCR3	P51677	355 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	TBX4	P57082	545 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	ZXDB	P98169	803 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	TNK2	Q07912	1038 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	TRIM14	Q14142	442 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	MPPE1	Q53F39	396 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	OR6B2	Q6IFH4	312 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927		Q6ZNB5	142 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	AGPAT1	Q99943	283 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	CHRD	Q9H2X0	955 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	ACP6	Q9NPH0	428 aa		13.62	□□□□□ -0.23
SERF2-215	ENST00000475927	OBSL1	O75147	1896 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	CHURC1-FNTB	B4DL54	471 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	GABBR2	O75899	941 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	CALCA	P01258	141 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	APOE	P02649	317 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	APOD	P05090	189 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	ARSA	P15289	507 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	COL9A1	P20849	921 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	MMP8	P22894	467 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	CCR1	P32246	355 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	PRKCI	P41743	596 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	MATK	P42679	507 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	CXCL12	P48061	93 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	PGF	P49763	221 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	VCP	P55072	806 aa	Known RBP	13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	OXCT1	P55809	520 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	MRPS21	P82921	87 aa	Known RBP	13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	ZBED6	P86452	979 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	ANO4	Q32M45	955 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	DCAF6	Q58WW2	860 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	LY6G5C	Q5SRR4	150 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	IER5L	Q5T953	404 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	TRIM68	Q6AZZ1	485 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	BHLHA9	Q7RTU4	235 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	TRMT11	Q7Z4G4	463 aa	Known RBP	13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	IRF2BP2	Q7Z5L9	587 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	NOP9	Q86U38	636 aa	Known RBP	13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	BBS7	Q8IWZ6	715 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	ZNF687	Q8N1G0	1237 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	TMEM105	Q8N8V8	129 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	RIN3	Q8TB24	985 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	EDEM1	Q92611	657 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	TMA16	Q96EY4	203 aa	Known RBP	13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	BTN2A3P	Q96KV6	586 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	CPXM1	Q96SM3	734 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	NCAPG	Q9BPX3	1015 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	BBS2	Q9BXC9	721 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	RETREG1	Q9H6L5	497 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	DLGAP2	Q9P1A6	1054 aa		13.61	□□□□□ -0.23
SERF2-215	ENST00000475927	NOCT	Q9UK39	431 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms