RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 LVRNQ6Q4G3 990 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 ALKAL1Q6UXT8 129 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 CENPUQ71F23 418 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 ZNF467Q7Z7K2 595 aaPredicted RBP12.92□□□□□ -0.34
RNF220-211ENST00000474956 OSTM1Q86WC4 334 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 PARK7Q99497 189 aaKnown RBP12.92□□□□□ -0.34
RNF220-211ENST00000474956 DENND2DQ9H6A0 471 aaPredicted RBP12.92□□□□□ -0.34
RNF220-211ENST00000474956 ASNSD1Q9NWL6 643 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 APOC4-APOC2K7ER74 178 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 APOC2P02655 101 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 CTSHP09668 335 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 TROVE2P10155 538 aaKnown RBP eCLIP12.91□□□□□ -0.34
RNF220-211ENST00000474956 ACADSP16219 412 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 KRT81Q14533 505 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 ZNF410Q86VK4 478 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 APLFQ8IW19 511 aaPredicted RBP12.91□□□□□ -0.34
RNF220-211ENST00000474956 CCDC110Q8TBZ0 833 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 LPPQ93052 612 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 CEP41Q9BYV8 373 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 ALG13Q9NP73 1137 aaKnown RBP12.91□□□□□ -0.34
RNF220-211ENST00000474956 WDR35Q9P2L0 1181 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 KIAA0319Q5VV43 1072 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 IQSEC1Q6DN90 963 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 NOTUMQ6P988 496 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 C3orf62Q6ZUJ4 267 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 TP53INP2Q8IXH6 220 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 PCDH18Q9HCL0 1135 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 SHOC2Q9UQ13 582 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 KCNN4O15554 427 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 AMHP03971 560 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 GRIA1P42261 906 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 HUNKP57058 714 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 SMG8Q8ND04 991 aaKnown RBP12.91□□□□□ -0.34
RNF220-211ENST00000474956 DNAJC9Q8WXX5 260 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 YIPF3Q9GZM5 350 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 RABGEF1Q9UJ41 708 aa12.91□□□□□ -0.34
RNF220-211ENST00000474956 WDR91A4D1P6 747 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 H0Y3Z8 333 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 MCF2LO15068 1137 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 ENTPD5O75356 428 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 KRT4P19013 534 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 SLC6A3Q01959 620 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 SEPT7Q16181 437 aaKnown RBP12.9□□□□□ -0.34
RNF220-211ENST00000474956 EFHC2Q5JST6 749 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 MORN1Q5T089 497 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 CLNKQ7Z7G1 428 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 PRPF39Q86UA1 669 aaKnown RBP12.9□□□□□ -0.34
RNF220-211ENST00000474956 TTC8Q8TAM2 541 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 RNF157Q96PX1 679 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 ZIC5Q96T25 663 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 PAAF1Q9BRP4 392 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 TUBB6Q9BUF5 446 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 USP29Q9HBJ7 922 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 NPHS2Q9NP85 383 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 STOML1Q9UBI4 398 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 FETUBQ9UGM5 382 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 NRCAMQ92823 1304 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 MBLAC1A4D2B0 266 aaPredicted RBP12.9□□□□□ -0.34
RNF220-211ENST00000474956 KPNA7A9QM74 516 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 ENDOD1O94919 500 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 ELK3P41970 407 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 PSEN2P49810 448 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 GEMIN4P57678 1058 aaKnown RBP12.9□□□□□ -0.34
RNF220-211ENST00000474956 ADAM17P78536 824 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 ROR1Q01973 937 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 NOMO1Q15155 1222 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 FBXO47Q5MNV8 452 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 MTDHQ86UE4 582 aaKnown RBP12.9□□□□□ -0.34
RNF220-211ENST00000474956 FAM131BQ86XD5 332 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 PPIL6Q8IXY8 311 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 PYROXD1Q8WU10 500 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 SLC4A5Q9BY07 1137 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 RHOBTB2Q9BYZ6 727 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 DHX35Q9H5Z1 703 aaKnown RBP12.9□□□□□ -0.34
RNF220-211ENST00000474956 TMEM30AQ9NV96 361 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 IPPQ9Y573 584 aa12.9□□□□□ -0.34
RNF220-211ENST00000474956 DPPA5A6NC42 116 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 CCDC22O60826 627 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 RARBP10826 455 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 SDC4P31431 198 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 GNL1P36915 607 aaPredicted RBP12.9□□□□□ -0.35
RNF220-211ENST00000474956 KLC1Q07866 573 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 LBRQ14739 615 aaKnown RBP12.9□□□□□ -0.35
RNF220-211ENST00000474956 CTC1Q2NKJ3 1217 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 DCAF4L1Q3SXM0 396 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 PAN2Q504Q3 1202 aaKnown RBP12.9□□□□□ -0.35
RNF220-211ENST00000474956 C4orf50Q6ZRC1 276 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 C2orf69Q8N8R5 385 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 ARHGAP39Q9C0H5 1083 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 RAB6BQ9NRW1 208 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 CNTN3Q9P232 1028 aa12.9□□□□□ -0.35
RNF220-211ENST00000474956 I3L4J1 428 aa12.89□□□□□ -0.35
RNF220-211ENST00000474956 PHBP35232 272 aa12.89□□□□□ -0.35
RNF220-211ENST00000474956 MAP2K5Q13163 448 aa12.89□□□□□ -0.35
RNF220-211ENST00000474956 MUM1Q2TAK8 710 aa12.89□□□□□ -0.35
RNF220-211ENST00000474956 C11orf91Q3C1V1 193 aa12.89□□□□□ -0.35
RNF220-211ENST00000474956 HFE2Q6ZVN8 426 aa12.89□□□□□ -0.35
RNF220-211ENST00000474956 TMEM110Q86TL2 294 aa12.89□□□□□ -0.35
RNF220-211ENST00000474956 BEST2Q8NFU1 509 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms