RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 KRIT1O00522 736 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 MDM4O15151 490 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 IRAK2O43187 625 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 ZMYND10O75800 440 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 TJP3O95049 919 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 FGGP02679 453 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 PTPN2P17706 415 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 GABRR2P28476 465 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 HOXA9P31269 272 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 RGS19P49795 217 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 TUBP50607 506 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 ZNF135P52742 658 aaPredicted RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 HDAC4P56524 1084 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 TBX4P57082 545 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 TAS2R40P59535 323 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 AMPD2Q01433 879 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 SLC25A11Q02978 314 aaKnown RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 ZNF211Q13398 564 aaPredicted RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 NNTQ13423 1086 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 TFDP2Q14188 446 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 PPP2R5EQ16537 467 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 TFDP3Q5H9I0 405 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 KCNT1Q5JUK3 1230 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 ACBD5Q5T8D3 534 aaPredicted RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 KAZNQ674X7 775 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 NUGGCQ68CJ6 796 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 MSANTD2Q6P1R3 559 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 SPRED2Q7Z698 418 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 RFX6Q8HWS3 928 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 PSTKQ8IV42 348 aaKnown RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 UNC45BQ8IWX7 931 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 ACTRT1Q8TDG2 376 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 CD101Q93033 1021 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 RNF25Q96BH1 459 aaPredicted RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 PGAP3Q96FM1 320 aaPredicted RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 MYRFLQ96LU7 910 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 EPAS1Q99814 870 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 SNRNP25Q9BV90 132 aaKnown RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 CARD6Q9BX69 1037 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 ATXN3LQ9H3M9 355 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 SFXN1Q9H9B4 322 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 KLHL11Q9NVR0 708 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 IL37Q9NZH6 218 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 STIM2Q9P246 746 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 TLR6Q9Y2C9 796 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 TMEM265A0A087WTH1 108 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 TRAV19A0A0A6YYK7 116 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 PI4K2BG5E9Z4 385 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 ZNF197O14709 1029 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 PER2O15055 1255 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 ZNF185O15231 689 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 MOCS2O96007 188 aaPredicted RBP10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 CKMP06732 381 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 RARAP10276 462 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 MBL2P11226 248 aaPredicted RBP10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 EPCAMP16422 314 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 ZFXP17010 805 aaPredicted RBP10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 MARCKSL1P49006 195 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 HARS2P49590 506 aaKnown RBP10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 COG7P83436 770 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 SH3PXD2AQ5TCZ1 1133 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 TRNP1Q6NT89 227 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 LILRA6Q6PI73 481 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 LRRC31Q6UY01 552 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 SPOCD1Q6ZMY3 1216 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 EP400NLQ6ZTU2 488 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 SCD5Q86SK9 330 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 COG1Q8WTW3 980 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 CENPIQ92674 756 aaPredicted RBP10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 ALG3Q92685 438 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.73e-8■■□□□ 12
PRPF38A-202ENST00000474048 NTAN1Q96AB6 310 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 RUNDC3BQ96NL0 473 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 FERMT1Q9BQL6 677 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 TKTL2Q9H0I9 626 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 ZNF576Q9H609 170 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 IGFLR1Q9H665 355 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 NMUR1Q9HB89 426 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 HOMER3Q9NSC5 361 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 PIGVQ9NUD9 493 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 DONSONQ9NYP3 566 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 SFMBT1Q9UHJ3 866 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 ZMYM5Q9UJ78 669 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 LSM7Q9UK45 103 aaKnown RBP10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 NUDT5Q9UKK9 219 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 HBS1LQ9Y450 684 aaKnown RBP10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 HCFC2Q9Y5Z7 792 aa10.67□□□□□ -0.7
PRPF38A-202ENST00000474048 MKI67P46013 3256 aaKnown RBP10.66□□□□□ -0.7
PRPF38A-202ENST00000474048 TYW5A2RUC4 315 aaKnown RBP10.66□□□□□ -0.7
PRPF38A-202ENST00000474048 ZNF840PA6NDX5 716 aa10.66□□□□□ -0.7
PRPF38A-202ENST00000474048 CCDC188H7C350 402 aa10.66□□□□□ -0.7
PRPF38A-202ENST00000474048 EEF2KO00418 725 aaKnown RBP10.66□□□□□ -0.7
PRPF38A-202ENST00000474048 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
PRPF38A-202ENST00000474048 MSI1O43347 362 aaKnown RBP10.66□□□□□ -0.7
PRPF38A-202ENST00000474048 CREB3O43889 395 aa10.66□□□□□ -0.7
PRPF38A-202ENST00000474048 ENDOD1O94919 500 aa10.66□□□□□ -0.7
PRPF38A-202ENST00000474048 HMBSP08397 361 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms