RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 NUP205Q92621 2012 aa14.23□□□□□ -0.13
CHD3-209ENST00000473376 IGHV1OR15-9A0A0B4J2B8 117 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 PRRT4C9JH25 899 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 PMM2O15305 246 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 SLC16A3O15427 465 aaKnown RBP14.22□□□□□ -0.13
CHD3-209ENST00000473376 PROS1P07225 676 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 TRIM49P0CI25 452 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 TRIM49CP0CI26 452 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 IRF1P10914 325 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 EPB41P11171 864 aaKnown RBP14.22□□□□□ -0.13
CHD3-209ENST00000473376 MXI1P50539 228 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 RPL6Q02878 288 aaKnown RBP14.22□□□□□ -0.13
CHD3-209ENST00000473376 GFPT1Q06210 699 aaPredicted RBP14.22□□□□□ -0.13
CHD3-209ENST00000473376 ZNF33AQ06730 810 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 SEMA3BQ13214 749 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 ORC1Q13415 861 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 EGFLAMQ63HQ2 1017 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 TTC30AQ86WT1 665 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 ZC3H3Q8IXZ2 948 aaKnown RBP14.22□□□□□ -0.13
CHD3-209ENST00000473376 UCMAQ8WVF2 138 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 HEXIM2Q96MH2 286 aaKnown RBP14.22□□□□□ -0.13
CHD3-209ENST00000473376 CISHQ9NSE2 258 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 OLA1Q9NTK5 396 aaKnown RBP14.22□□□□□ -0.13
CHD3-209ENST00000473376 STRIP2Q9ULQ0 834 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 THADAQ6YHU6 1953 aa14.22□□□□□ -0.13
CHD3-209ENST00000473376 PATE3B3GLJ2 98 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 LATS1O95835 1130 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 KLKB1P03952 638 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 SYPP08247 313 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 ENGP17813 658 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 RAD23BP54727 409 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 YWHAEP62258 255 aaKnown RBP14.21□□□□□ -0.13
CHD3-209ENST00000473376 FKBP3Q00688 224 aaKnown RBP14.21□□□□□ -0.13
CHD3-209ENST00000473376 STARD3Q14849 445 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 SYCP2LQ5T4T6 812 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 FYB2Q5VWT5 728 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 TPGS1Q6ZTW0 290 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 PIP4P1Q86T03 277 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 MIB1Q86YT6 1006 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 KDF1Q8NAX2 398 aaPredicted RBP14.21□□□□□ -0.13
CHD3-209ENST00000473376 SLC4A11Q8NBS3 891 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 CADM4Q8NFZ8 388 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 ELMO3Q96BJ8 720 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 PLD4Q96BZ4 506 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 MRGPRX1Q96LB2 322 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 ZDHHC5Q9C0B5 715 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 PCED1AQ9H1Q7 454 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 THAP10Q9P2Z0 257 aaPredicted RBP14.21□□□□□ -0.13
CHD3-209ENST00000473376 STOML2Q9UJZ1 356 aa14.21□□□□□ -0.13
CHD3-209ENST00000473376 MYOFQ9NZM1 2061 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 H0Y626 953 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 TRIM16O95361 564 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 IGLV3-19P01714 112 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 CYBBP04839 570 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 CD58P19256 250 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 NDUFV2P19404 249 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 KCNA4P22459 653 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 ITPKAP23677 461 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 OXTRP30559 389 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 RDXP35241 583 aaKnown RBP14.2□□□□□ -0.14
CHD3-209ENST00000473376 MFAP3P55082 362 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 LRRC63Q05C16 580 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 ZNF252P-AS1Q0IIN9 211 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 TRIP4Q15650 581 aaPredicted RBP14.2□□□□□ -0.14
CHD3-209ENST00000473376 FOXR2Q6PJQ5 311 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 PIGZQ86VD9 579 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 ELOA2Q8IYF1 753 aaPredicted RBP14.2□□□□□ -0.14
CHD3-209ENST00000473376 FRMD1Q8N878 549 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 SPATA20Q8TB22 786 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 KCTD13Q8WZ19 329 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 SEMA4DQ92854 862 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 ITM2CQ9NQX7 267 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 DNAAF2Q9NVR5 837 aaKnown RBP14.2□□□□□ -0.14
CHD3-209ENST00000473376 MARCH2Q9P0N8 246 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 MAPK8IP1Q9UQF2 711 aa14.2□□□□□ -0.14
CHD3-209ENST00000473376 HBS1LQ9Y450 684 aaKnown RBP14.2□□□□□ -0.14
CHD3-209ENST00000473376 MAP1BP46821 2468 aaKnown RBP14.2□□□□□ -0.14
CHD3-209ENST00000473376 MYO18AQ92614 2054 aaKnown RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 FAM221BA6H8Z2 402 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 ARHGAP33O14559 1287 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 XPO1O14980 1071 aaKnown RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 TRIM24O15164 1050 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 KRT37O76014 449 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 ZBED1O96006 694 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 GNSP15586 552 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 TBXAS1P24557 533 aaPredicted RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 PPP1R2P41236 205 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 ATXN3P54252 364 aaPredicted RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 BCAT1P54687 386 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 YWHAGP61981 247 aaKnown RBP eCLIP14.19□□□□□ -0.14
CHD3-209ENST00000473376 WDR45BQ5MNZ6 344 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 MPP7Q5T2T1 576 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 ZNF658Q5TYW1 1059 aaPredicted RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 KIAA1211LQ6NV74 962 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 TOGARAM2Q6ZUX3 1019 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 HDDC3Q8N4P3 179 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 ZNF557Q8N988 423 aaPredicted RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 DNASE2BQ8WZ79 361 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 PIWIL1Q96J94 861 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms