RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 KALRNO60229 2985 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 MYO16Q9Y6X6 1858 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ATG2BQ96BY7 2078 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 TMEM8BA6NDV4 472 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 USP27XA6NNY8 438 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 TGFBR3LH3BV60 316 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 TAF4O00268 1085 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 GFPT2O94808 682 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 MICAL2O94851 1124 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 AVPP01185 164 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 C4BPAP04003 597 aaKnown RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 SERPING1P05155 500 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 PLEKP08567 350 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 KRT19P08727 400 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 PSMC3P17980 439 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 VAMP1P23763 118 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 HNRNPH3P31942 346 aaKnown RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 CYLC1P35663 651 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 SOX5P35711 763 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 STAT1P42224 750 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 SOX9P48436 509 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 NOVA1P51513 510 aaKnown RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 GUCY2FP51841 1108 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 MLLT6P55198 1093 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 CDK17Q00537 523 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 KLHL30Q0D2K2 578 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF252P-AS1Q0IIN9 211 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 TRPC3Q13507 836 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 LRRC32Q14392 662 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 DRAP1Q14919 205 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 HIF1AQ16665 826 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 DUOXA2Q1HG44 320 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF699Q32M78 642 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 SPOPLQ6IQ16 392 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 TXNDC11Q6PKC3 985 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 TRAPPC11Q7Z392 1133 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 PRICKLE2Q7Z3G6 844 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 KBTBD6Q86V97 674 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 CCAR2Q8N163 923 aaKnown RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 TMEM130Q8N3G9 435 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 ACRBPQ8NEB7 543 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 DEPDC1BQ8WUY9 529 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 SYN2Q92777 582 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 SMARCD2Q92925 531 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 KAT5Q92993 513 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 PPP1R13BQ96KQ4 1090 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 SUSD3Q96L08 255 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 KREMEN1Q96MU8 473 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 CHP1Q99653 195 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 CORO1BQ9BR76 489 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 GPR88Q9GZN0 384 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 DEF6Q9H4E7 631 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 TRPV4Q9HBA0 871 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 UBE2TQ9NPD8 197 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-205ENST00000472928 SPTLC3Q9NUV7 552 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 RAB20Q9NX57 234 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 ARHGAP20Q9P2F6 1191 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 PARP2Q9UGN5 583 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 BACE2Q9Y5Z0 518 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 CDY1Q9Y6F8 540 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF462Q96JM2 2506 aa6.76□□□□□ -1.33
HDAC1-205ENST00000472928 MYBPHLA2RUH7 354 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 FAM187AA6NFU0 413 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 TMEM189-UBE2V1I3L0A0 370 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF263O14978 683 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 CCP110O43303 1012 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 NDUFA10O95299 355 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 IPO7O95373 1038 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 ASS1P00966 412 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 ITGB3P05106 788 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 CCDC175P0C221 793 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 KRT5P13647 590 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 FERP16591 822 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 PTPN2P17706 415 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 TKTP29401 623 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 POLR2BP30876 1174 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 EIF4A3P38919 411 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 MPLP40238 635 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 USP8P40818 1118 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 KIF11P52732 1056 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 MFAP3P55082 362 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 MYL6P60660 151 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 POU5F1Q01860 360 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 ROR1Q01973 937 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 ELAVL2Q12926 359 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 CCINQ13939 588 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 SLC10A6Q3KNW5 377 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 GLRA4Q5JXX5 417 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 RNF43Q68DV7 783 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 PKN3Q6P5Z2 889 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 ENOSF1Q7L5Y1 443 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 LYSMD3Q7Z3D4 306 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 FMNL3Q8IVF7 1028 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 MFSD6LQ8IWD5 586 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 CD302Q8IX05 232 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 CCDC170Q8IYT3 715 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 HACE1Q8IYU2 909 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 C1orf127Q8N9H9 656 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 GAB3Q8WWW8 586 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 ZCCHC14Q8WYQ9 949 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms