RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 OTOL1A6NHN0 477 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-211ENST00000472490 LATS1O95835 1130 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 ERBB2P04626 1255 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 HMBSP08397 361 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 TPM1P09493 284 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 ADH5P11766 374 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 GJA4P35212 333 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 RPS9P46781 194 aaKnown RBP14.82□□□□□ -0.04
BRCA1-211ENST00000472490 SOX9P48436 509 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 CDK17Q00537 523 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 GAD2Q05329 585 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 MTA1Q13330 715 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 TRIM14Q14142 442 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 DCAF6Q58WW2 860 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 DGKKQ5KSL6 1271 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 OLFML1Q6UWY5 402 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 FAM183BPQ6ZVS7 135 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 IRF2BP2Q7Z5L9 587 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 CCDC26Q8TAB7 109 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 SYN2Q92777 582 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-211ENST00000472490 IER2Q9BTL4 223 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 FOXQ1Q9C009 403 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 SPHK2Q9NRA0 654 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 RRN3Q9NYV6 651 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 WDR35Q9P2L0 1181 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 NAALADL1Q9UQQ1 740 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 TLR6Q9Y2C9 796 aa14.82□□□□□ -0.04
BRCA1-211ENST00000472490 LUC7L2Q9Y383 392 aaKnown RBP14.82□□□□□ -0.04
BRCA1-211ENST00000472490 FARP1Q9Y4F1 1045 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-211ENST00000472490 BZW2Q9Y6E2 419 aaKnown RBP14.82□□□□□ -0.04
BRCA1-211ENST00000472490 OBSL1O75147 1896 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-211ENST00000472490 TRDMT1O14717 391 aaKnown RBP14.81□□□□□ -0.04
BRCA1-211ENST00000472490 SCAMP3O14828 347 aaKnown RBP14.81□□□□□ -0.04
BRCA1-211ENST00000472490 HOXC11O43248 304 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-211ENST00000472490 GREM1O60565 184 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 CYBBP04839 570 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 CYP17A1P05093 508 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 FYNP06241 537 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 SLC2A3P11169 496 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 CHRNB2P17787 502 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 TNFAIP3P21580 790 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 DRD1P21728 446 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 MMP8P22894 467 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 TARSP26639 723 aaKnown RBP14.81□□□□□ -0.04
BRCA1-211ENST00000472490 GBP1P32455 592 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 EIF2DP41214 584 aaKnown RBP14.81□□□□□ -0.04
BRCA1-211ENST00000472490 SLC11A2P49281 568 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 TBX4P57082 545 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 ZBED6P86452 979 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 KLHL30Q0D2K2 578 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 SPECC1LQ69YQ0 1117 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 RHBDF2Q6PJF5 856 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 Q6ZNB5 142 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 NUDT18Q6ZVK8 323 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 DENND1CQ8IV53 801 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 CCDC105Q8IYK2 499 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 SYNPOQ8N3V7 929 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 TMEM105Q8N8V8 129 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 DQX1Q8TE96 717 aaKnown RBP14.81□□□□□ -0.04
BRCA1-211ENST00000472490 CD101Q93033 1021 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 CLDN23Q96B33 292 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 SLC2A13Q96QE2 648 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 P2RY13Q9BPV8 354 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 TJP2Q9UDY2 1190 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 SLC12A6Q9UHW9 1150 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 STAP1Q9ULZ2 295 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 CAPN11Q9UMQ6 739 aa14.81□□□□□ -0.04
BRCA1-211ENST00000472490 PI15O43692 258 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 CALB1P05937 261 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 DCNP07585 359 aaKnown RBP14.8□□□□□ -0.04
BRCA1-211ENST00000472490 UNGP13051 313 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-211ENST00000472490 NOS2P35228 1153 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 PRKCIP41743 596 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 MATKP42679 507 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 VCPP55072 806 aaKnown RBP14.8□□□□□ -0.04
BRCA1-211ENST00000472490 CENPCQ03188 943 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 PON2Q15165 354 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 CLEC16AQ2KHT3 1053 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 ANO4Q32M45 955 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 FBXO43Q4G163 708 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 TMEM196Q5HYL7 178 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 LY6G5CQ5SRR4 150 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 FAM102AQ5T9C2 384 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-211ENST00000472490 SYPL2Q5VXT5 272 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 SARM1Q6SZW1 724 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 ARCQ7LC44 396 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 XYLT1Q86Y38 959 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 DEFB106AQ8N104 65 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 CPXM2Q8N436 756 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 AZIN2Q96A70 460 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 XPO6Q96QU8 1125 aaKnown RBP14.8□□□□□ -0.04
BRCA1-211ENST00000472490 DDX50Q9BQ39 737 aaKnown RBP14.8□□□□□ -0.04
BRCA1-211ENST00000472490 IRX2Q9BZI1 471 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-211ENST00000472490 AGO1Q9UL18 857 aaKnown RBP14.8□□□□□ -0.04
BRCA1-211ENST00000472490 BDP1A6H8Y1 2624 aa14.8□□□□□ -0.04
BRCA1-211ENST00000472490 SHISA7A6NL88 538 aa14.79□□□□□ -0.04
BRCA1-211ENST00000472490 MSI1O43347 362 aaKnown RBP14.79□□□□□ -0.04
BRCA1-211ENST00000472490 NCOR1O75376 2440 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms