RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 RDXP35241 583 aaKnown RBP17.57■□□□□ 0.4
CCM2-205ENST00000472223 SSR1P43307 286 aaKnown RBP17.57■□□□□ 0.4
CCM2-205ENST00000472223 HARS2P49590 506 aaKnown RBP17.57■□□□□ 0.4
CCM2-205ENST00000472223 PGFP49763 221 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 TBX4P57082 545 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 SLC7A9P82251 487 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 MESDQ14696 234 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 CDO1Q16878 200 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 ARL13BQ3SXY8 428 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 ZNF662Q6ZS27 426 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 STRADAQ7RTN6 431 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 UNC45BQ8IWX7 931 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 SYCE1Q8N0S2 351 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 TTC16Q8NEE8 873 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
CCM2-205ENST00000472223 DQX1Q8TE96 717 aaKnown RBP17.57■□□□□ 0.4
CCM2-205ENST00000472223 SUSD6Q92537 303 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 E2F7Q96AV8 911 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 CYP2S1Q96SQ9 504 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 NPY6RQ99463 290 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 POMKQ9H5K3 350 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 KIF9Q9HAQ2 790 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 OSGEPQ9NPF4 335 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 TDP1Q9NUW8 608 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 SH3BP1Q9Y3L3 701 aa17.57■□□□□ 0.4
CCM2-205ENST00000472223 HBS1LQ9Y450 684 aaKnown RBP17.57■□□□□ 0.4
CCM2-205ENST00000472223 TMEM110-MUSTN1A8MSY1 372 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 BUB1O43683 1085 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 MOSPD3O75425 235 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 APOEP02649 317 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 WEE1P30291 646 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 CCR1P32246 355 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 SLC1A1P43005 524 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 HADHBP55084 474 aaKnown RBP17.56■□□□□ 0.4
CCM2-205ENST00000472223 NNTQ13423 1086 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 HADHQ16836 314 aaKnown RBP17.56■□□□□ 0.4
CCM2-205ENST00000472223 CCDC14Q49A88 953 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 STXBP5Q5T5C0 1151 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 PTCRAQ6ISU1 281 aaPredicted RBP17.56■□□□□ 0.4
CCM2-205ENST00000472223 SCYL2Q6P3W7 929 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 NPAS3Q8IXF0 933 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 PLCD3Q8N3E9 789 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 CELF5Q8N6W0 485 aaKnown RBP17.56■□□□□ 0.4
CCM2-205ENST00000472223 ADAM32Q8TC27 787 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 FAM172AQ8WUF8 416 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 ALS2CR12Q96Q35 445 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 DCLK3Q9C098 648 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 LACRTQ9GZZ8 138 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 RNF38Q9H0F5 515 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 WDCPQ9H6R7 721 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.56■□□□□ 0.47e-6■□□□□ 10.1
CCM2-205ENST00000472223 TFR2Q9UP52 801 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 USTQ9Y2C2 406 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 TLR6Q9Y2C9 796 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 CPQQ9Y646 472 aa17.56■□□□□ 0.4
CCM2-205ENST00000472223 NOTCH4Q99466 2003 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 RCCD1A6NED2 376 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 GRXCR2A6NFK2 248 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 HMBSP08397 361 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 TRIP4Q15650 581 aaPredicted RBP17.55■□□□□ 0.4
CCM2-205ENST00000472223 C15orf59Q2T9L4 293 aaPredicted RBP17.55■□□□□ 0.4
CCM2-205ENST00000472223 ODF2Q5BJF6 829 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 NUGGCQ68CJ6 796 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 MTSS1LQ765P7 747 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 DAAM2Q86T65 1068 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 TAC4Q86UU9 113 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 ARID3BQ8IVW6 561 aaPredicted RBP17.55■□□□□ 0.4
CCM2-205ENST00000472223 TDRD5Q8NAT2 981 aaKnown RBP17.55■□□□□ 0.4
CCM2-205ENST00000472223 KIAA1524Q8TCG1 905 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 SMARCD2Q92925 531 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 NT5C3BQ969T7 300 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 PLD4Q96BZ4 506 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 PGAP3Q96FM1 320 aaPredicted RBP17.55■□□□□ 0.4
CCM2-205ENST00000472223 TBCBQ99426 244 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 PHF7Q9BWX1 381 aaPredicted RBP17.55■□□□□ 0.4
CCM2-205ENST00000472223 ZFP14Q9HCL3 533 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 SMPD4Q9NXE4 827 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 TRMT1Q9NXH9 659 aaKnown RBP17.55■□□□□ 0.4
CCM2-205ENST00000472223 THEGQ9P2T0 379 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 CDH22Q9UJ99 828 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 ARHGAP26Q9UNA1 814 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 ZNF510Q9Y2H8 683 aa17.55■□□□□ 0.4
CCM2-205ENST00000472223 SZT2Q5T011 3432 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 MDM4O15151 490 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 IRAK2O43187 625 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 SPOPO43791 374 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 PRPSAP2O60256 369 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 PROSCO94903 275 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 OLFM2O95897 454 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 IRF1P10914 325 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 LAMP2P13473 410 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 MAN1A1P33908 653 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 SLC11A2P49281 568 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 RING1Q06587 406 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 BRMS1LQ5PSV4 323 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 CC2D1AQ6P1N0 951 aaPredicted RBP17.54■□□□□ 0.4
CCM2-205ENST00000472223 NIPA2Q8N8Q9 360 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 ATP6V0D2Q8N8Y2 350 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 UBE2Q2Q8WVN8 375 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 BTBD6Q96KE9 485 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms