RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 FBXO44Q9H4M3 255 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 C6orf106Q9H6K1 298 aaPredicted RBP20.05■□□□□ 0.8
SORT1-203ENST00000471996 KIAA1586Q9HCI6 787 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 CYLDQ9NQC7 956 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 NXF1Q9UBU9 619 aaKnown RBP20.05■□□□□ 0.8
SORT1-203ENST00000471996 FTSJ1Q9UET6 329 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 CCDC39Q9UFE4 941 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 PCDHGA1Q9Y5H4 931 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 ZNF462Q96JM2 2506 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 TEX51A0A1B0GUA7 166 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 J3QKU1 62 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 AP1G2O75843 785 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 DLATP10515 647 aaKnown RBP20.04■□□□□ 0.8
SORT1-203ENST00000471996 JUPP14923 745 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 TNNI1P19237 187 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 SEMG2Q02383 582 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 ORC1Q13415 861 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 Q6ZNB5 142 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 FAM124AQ86V42 546 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 CACUL1Q86Y37 369 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 ZMIZ2Q8NF64 920 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 TM9SF3Q9HD45 589 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 HSPBP1Q9NZL4 362 aa20.04■□□□□ 0.8
SORT1-203ENST00000471996 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.04■□□□□ 0.8
SORT1-203ENST00000471996 H0Y8X5 98 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 PAPSS1O43252 624 aaPredicted RBP20.03■□□□□ 0.8
SORT1-203ENST00000471996 PENKP01210 267 aaPredicted RBP20.03■□□□□ 0.8
SORT1-203ENST00000471996 HNF1BP35680 557 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 ZNF234Q14588 700 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 E2F5Q15329 346 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 INAVAQ3KP66 663 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 RRAGBQ5VZM2 374 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 GPR155Q7Z3F1 870 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 FUKQ8N0W3 1084 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 SMOQ99835 787 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 XYLT2Q9H1B5 865 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 KRT82Q9NSB4 513 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 PANK4Q9NVE7 773 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 OSER1Q9NX31 292 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 AK5Q9Y6K8 562 aa20.03■□□□□ 0.8
SORT1-203ENST00000471996 CFAP46Q8IYW2 2715 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 CAPN8A6NHC0 703 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 PRKCHP24723 683 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 ATICP31939 592 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 CTSKP43235 329 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 PLA2G4AP47712 749 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 MYL6P60660 151 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 CFHR1Q03591 330 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 FYB2Q5VWT5 728 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 KLHDC10Q6PID8 442 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 SNIP1Q8TAD8 396 aaKnown RBP20.02■□□□□ 0.8
SORT1-203ENST00000471996 BAP1Q92560 729 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 TNIP3Q96KP6 325 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 CGRRF1Q99675 332 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 SMYD3Q9H7B4 428 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 CSNK1G1Q9HCP0 422 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 ELOVL2Q9NXB9 296 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 TENM4Q6N022 2769 aa20.02■□□□□ 0.8
SORT1-203ENST00000471996 CABIN1Q9Y6J0 2220 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 BEST1O76090 585 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 EPHX1P07099 455 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 CDK4P11802 303 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 ACSL1P33121 698 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 CLDN6P56747 220 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 IL9RQ01113 521 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 TRPC3Q13507 836 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 RTP5Q14D33 572 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 PSMD6Q15008 389 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 SNRNP35Q16560 246 aaKnown RBP20.01■□□□□ 0.79
SORT1-203ENST00000471996 KCNT1Q5JUK3 1230 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 PCSK4Q6UW60 755 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 LAYNQ6UX15 382 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 RDH13Q8NBN7 331 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 RBBP8NLQ8NC74 664 aaPredicted RBP20.01■□□□□ 0.79
SORT1-203ENST00000471996 OR2T3Q8NH03 318 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 PIWIL1Q96J94 861 aaKnown RBP20.01■□□□□ 0.79
SORT1-203ENST00000471996 NRSN2Q9GZP1 204 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 DNMT3LQ9UJW3 386 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 SCML2Q9UQR0 700 aa20.01■□□□□ 0.79
SORT1-203ENST00000471996 ENC1O14682 589 aa20■□□□□ 0.79
SORT1-203ENST00000471996 MDM4O15151 490 aa20■□□□□ 0.79
SORT1-203ENST00000471996 DFNA5O60443 496 aa20■□□□□ 0.79
SORT1-203ENST00000471996 TSPAN3O60637 253 aa20■□□□□ 0.79
SORT1-203ENST00000471996 STC2O76061 302 aa20■□□□□ 0.79
SORT1-203ENST00000471996 C1SP09871 688 aa20■□□□□ 0.79
SORT1-203ENST00000471996 MAP3K7CLP57077 242 aa20■□□□□ 0.79
SORT1-203ENST00000471996 EIF4HQ15056 248 aaKnown RBP20■□□□□ 0.79
SORT1-203ENST00000471996 STXBP4Q6ZWJ1 553 aa20■□□□□ 0.79
SORT1-203ENST00000471996 ANKS1BQ7Z6G8 1248 aa20■□□□□ 0.79
SORT1-203ENST00000471996 ZNF516Q92618 1163 aa20■□□□□ 0.79
SORT1-203ENST00000471996 SYAP1Q96A49 352 aaPredicted RBP20■□□□□ 0.79
SORT1-203ENST00000471996 CCDC127Q96BQ5 260 aa20■□□□□ 0.79
SORT1-203ENST00000471996 BIRC7Q96CA5 298 aa20■□□□□ 0.79
SORT1-203ENST00000471996 LHX5Q9H2C1 402 aa20■□□□□ 0.79
SORT1-203ENST00000471996 VRTNQ9H8Y1 702 aa20■□□□□ 0.79
SORT1-203ENST00000471996 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20■□□□□ 0.79
SORT1-203ENST00000471996 ZNF510Q9Y2H8 683 aa20■□□□□ 0.79
SORT1-203ENST00000471996 KNL1Q8NG31 2342 aa20■□□□□ 0.79
SORT1-203ENST00000471996 MUC22E2RYF6 1773 aaPredicted RBP19.99■□□□□ 0.79
SORT1-203ENST00000471996 CYP26A1O43174 497 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms