RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 HDAC9Q9UKV0 1011 aa3.89□□□□□ -1.79
SOX2-OT-204ENST00000469278 MAGED2Q9UNF1 606 aaPredicted RBP3.89□□□□□ -1.79
SOX2-OT-204ENST00000469278 PLEKHM1Q9Y4G2 1056 aa3.89□□□□□ -1.79
SOX2-OT-204ENST00000469278 A0A087WWL8 130 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 ABHD14A-ACY1A0A1B0GW23 586 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 TMEM233B4DJY2 109 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 IFRD1O00458 451 aaPredicted RBP3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 THAP12O43422 761 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 ABCB4P21439 1286 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 FPR3P25089 353 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 CDC25AP30304 524 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 UCP3P55916 312 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 CTBP1Q13363 440 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 BOP1Q14137 746 aaKnown RBP3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 STARD3Q14849 445 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 ARHGAP40Q5TG30 622 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 IZUMO3Q5VZ72 239 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 NR2C2APQ86WQ0 139 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 DNAJC5GQ8N7S2 189 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 RNF152Q8N8N0 203 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 CCDC150Q8NCX0 1101 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 FAM46DQ8NEK8 389 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 ZNF398Q8TD17 642 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 SMCR8Q8TEV9 937 aaPredicted RBP3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 MAP4K1Q92918 833 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 TRIM63Q969Q1 353 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 CCDC17Q96LX7 622 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 MOGAT1Q96PD6 335 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 MEIS3Q99687 375 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 PPCSQ9HAB8 311 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 HESX1Q9UBX0 185 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 SSX2IPQ9Y2D8 614 aa3.88□□□□□ -1.79
SOX2-OT-204ENST00000469278 MBD3L4A6NDZ8 208 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 MBD3L3A6NE82 208 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 BTBD19C9JJ37 291 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 DCLK1O15075 740 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 NCK2O43639 380 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 CNOT3O75175 753 aaKnown RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 TCEA3O75764 348 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 NGFRP08138 427 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 XRCC6P12956 609 aaKnown RBP eCLIP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 IL1R1P14778 569 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 TECP42680 631 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 TRAPPC10P48553 1259 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 RPS13P62277 151 aaKnown RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 TNFAIP2Q03169 654 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 TRIM14Q14142 442 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 PDCD2Q16342 344 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 ARL13BQ3SXY8 428 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 DCAF12L1Q5VU92 463 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 FAM160B1Q5W0V3 765 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 CAPRIN2Q6IMN6 1127 aaKnown RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 FBXO38Q6PIJ6 1188 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 RNF44Q7L0R7 432 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 BEND5Q7L4P6 421 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 YAF2Q8IY57 180 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 SYTL1Q8IYJ3 562 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 SDR16C5Q8N3Y7 309 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 OR56A3Q8NH54 315 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 B4GALNT2Q8NHY0 566 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 MPLKIPQ8TAP9 179 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 POF1BQ8WVV4 589 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 ZNF566Q969W8 418 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 KIAA1191Q96A73 305 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 LTV1Q96GA3 475 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 ZNF479Q96JC4 524 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 FAM84BQ96KN1 310 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 DPCDQ9BVM2 203 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 TTYH3Q9C0H2 523 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 MS4A7Q9GZW8 240 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 A1CFQ9NQ94 594 aaKnown RBP3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 SELENONQ9NZV5 590 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 XPR1Q9UBH6 696 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 ZNF212Q9UDV6 495 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 CDC23Q9UJX2 597 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 PCDHGB2Q9Y5G2 931 aa3.87□□□□□ -1.79
SOX2-OT-204ENST00000469278 TRIP12Q14669 1992 aaPredicted RBP3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 A0A1W2PPC4 97 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 PYCARD-AS1I3L0S3 204 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 ANXA2P07355 339 aaKnown RBP3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 HARSP12081 509 aaKnown RBP3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 KLRC1P26715 233 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 PPIFP30405 207 aaKnown RBP3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 PPM1AP35813 382 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 VIPR2P41587 438 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 CARSP49589 748 aaKnown RBP3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 LOXL3P58215 753 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 KRT17Q04695 432 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 PMS2P11Q13670 270 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 DHX8Q14562 1220 aaKnown RBP3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 ELF2Q15723 593 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 KLHDC7AQ5VTJ3 777 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 RGS7BPQ6MZT1 257 aaPredicted RBP3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 HIBCHQ6NVY1 386 aaPredicted RBP3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 CUZD1Q86UP6 607 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 MMP21Q8N119 569 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 ATP11CQ8NB49 1132 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 RAPGEF4Q8WZA2 1011 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 SPSB4Q96A44 273 aa3.86□□□□□ -1.79
SOX2-OT-204ENST00000469278 SNX22Q96L94 193 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms