RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 RDXP35241 583 aaKnown RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 RFC1P35251 1148 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 GJC1P36383 396 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 FLT3P36888 993 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 KPNA1P52294 538 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 ZNF143P52747 638 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 RPL7AP62424 266 aaKnown RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 KCNC3Q14003 757 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 TAF5Q15542 800 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 TEAD2Q15562 447 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 HADHQ16836 314 aaKnown RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 ARL13BQ3SXY8 428 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 SLC25A52Q3SY17 297 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 C11orf63Q6NUN7 778 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 HFE2Q6ZVN8 426 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 BEND5Q7L4P6 421 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 ARCQ7LC44 396 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 GPR149Q86SP6 731 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 DDX42Q86XP3 938 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 TMC8Q8IU68 726 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 CCAR2Q8N163 923 aaKnown RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 RNF10Q8N5U6 811 aaKnown RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 MAB21L3Q8N8X9 362 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 TRIM58Q8NG06 486 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 JOSD2Q8TAC2 188 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 FNIP1Q8TF40 1166 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 FAM172AQ8WUF8 416 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 ING5Q8WYH8 240 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 ZNF707Q96C28 371 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 SLC2A13Q96QE2 648 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 CNPY3Q9BT09 278 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 LACRTQ9GZZ8 138 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 ADAM7Q9H2U9 754 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 SMOC2Q9H3U7 446 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 CCSER2Q9H7U1 834 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 NMUR1Q9HB89 426 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 MARCH2Q9P0N8 246 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 SLC12A6Q9UHW9 1150 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 LSM7Q9UK45 103 aaKnown RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 TFR2Q9UP52 801 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 NAALADL1Q9UQQ1 740 aa8.47□□□□□ -1.05
HDAC6-216ENST00000468949 USP15Q9Y4E8 981 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-216ENST00000468949 SLC12A8A0AV02 714 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 RCCD1A6NED2 376 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TMEM191CA6NGB0 347 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 C2CD4BA6NLJ0 364 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 COCHO43405 550 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 PRPSAP2O60256 369 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TADA3O75528 432 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 MTA2O94776 668 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TRUB2O95900 331 aaKnown RBP8.46□□□□□ -1.06
HDAC6-216ENST00000468949 F11P03951 625 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 HMBSP08397 361 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 IRF1P10914 325 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 SLC2A3P11169 496 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TNNT1P13805 278 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 GJA1P17302 382 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 CEBPBP17676 345 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 HDCP19113 662 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 GBP2P32456 591 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-216ENST00000468949 SLC1A1P43005 524 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 PTPN9P43378 593 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 HARS2P49590 506 aaKnown RBP8.46□□□□□ -1.06
HDAC6-216ENST00000468949 EPHA5P54756 1037 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 NTHL1P78549 312 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 COG7P83436 770 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 ACAP1Q15027 740 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TXNDC8Q6A555 127 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 SCYL2Q6P3W7 929 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 SYCE2Q6PIF2 218 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 ZNF662Q6ZS27 426 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 GAREM2Q75VX8 874 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 STRADAQ7RTN6 431 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 PEX26Q7Z412 305 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 SCD5Q86SK9 330 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TAC4Q86UU9 113 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 GJD3Q8N144 294 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 UBL4BQ8N7F7 174 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TPCN2Q8NHX9 752 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 SHKBP1Q8TBC3 707 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 ADAM32Q8TC27 787 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 KIAA1524Q8TCG1 905 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 DQX1Q8TE96 717 aaKnown RBP8.46□□□□□ -1.06
HDAC6-216ENST00000468949 BTBD6Q96KE9 485 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TBCBQ99426 244 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 DDX23Q9BUQ8 820 aaKnown RBP8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TASP1Q9H6P5 420 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 WDR6Q9NNW5 1121 aaKnown RBP8.46□□□□□ -1.06
HDAC6-216ENST00000468949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TRIM10Q9UDY6 481 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 TMEM59LQ9UK28 342 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 NUDT5Q9UKK9 219 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 AMFRQ9UKV5 643 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.46□□□□□ -1.06
HDAC6-216ENST00000468949 SH3BP1Q9Y3L3 701 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 NCOR1O75376 2440 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 XIRP2A4UGR9 3374 aa8.46□□□□□ -1.06
HDAC6-216ENST00000468949 VCANP13611 3396 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms