RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 BHMTQ93088 406 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 TOE1Q96GM8 510 aaKnown RBP13.78□□□□□ -0.2
PTPN7-207ENST00000468385 TWNKQ96RR1 684 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 HNRNPABQ99729 332 aaKnown RBP13.78□□□□□ -0.2
PTPN7-207ENST00000468385 USP36Q9P275 1121 aaKnown RBP13.78□□□□□ -0.2
PTPN7-207ENST00000468385 PCDHB9Q9Y5E1 797 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 STON1Q9Y6Q2 735 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 A0A1B0GTW7 788 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 KCNJ18B7U540 433 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 CBFA2T3O75081 653 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 STC2O76061 302 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 YEATS4O95619 227 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 ASS1P00966 412 aaKnown RBP13.77□□□□□ -0.21
PTPN7-207ENST00000468385 PENKP01210 267 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-207ENST00000468385 RPN1P04843 607 aaKnown RBP13.77□□□□□ -0.21
PTPN7-207ENST00000468385 ACO1P21399 889 aaKnown RBP13.77□□□□□ -0.21
PTPN7-207ENST00000468385 IL12RB1P42701 662 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 MFAP3P55082 362 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 ENPP2Q13822 863 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 GEN1Q17RS7 908 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 FYB2Q5VWT5 728 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 CCNI2Q6ZMN8 369 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-207ENST00000468385 SLC9A9Q8IVB4 645 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 TAF4BQ92750 862 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 JAKMIP2Q96AA8 810 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 ZNF396Q96N95 335 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-207ENST00000468385 ZDHHC5Q9C0B5 715 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 MKRN2Q9H000 416 aaKnown RBP13.77□□□□□ -0.21
PTPN7-207ENST00000468385 PRDM16Q9HAZ2 1276 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 PNPLA8Q9NP80 782 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 ITM2CQ9NQX7 267 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 THAP10Q9P2Z0 257 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-207ENST00000468385 DNMT3LQ9UJW3 386 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 SLC27A6Q9Y2P4 619 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 NFE2L3Q9Y4A8 694 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 GPSM3Q9Y4H4 160 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 PCDHA5Q9Y5H7 936 aa13.77□□□□□ -0.21
PTPN7-207ENST00000468385 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-207ENST00000468385 MEI4A8MW99 385 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 KLRC4O43908 158 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 KLKB1P03952 638 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 NCAM1P13591 858 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 AFMP43652 599 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 KIF11P52732 1056 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 INCA1Q0VD86 236 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 STK4Q13043 487 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 STARD3Q14849 445 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 C10orf120Q5SQS8 335 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 C1orf220Q5T0J3 134 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 SV2AQ7L0J3 742 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 SCD5Q86SK9 330 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 GLRX5Q86SX6 157 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 SLCO6A1Q86UG4 719 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 GRAMD1CQ8IYS0 662 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 ZNF276Q8N554 614 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 ZCCHC9Q8N567 271 aaKnown RBP13.76□□□□□ -0.21
PTPN7-207ENST00000468385 KIAA0895Q8NCT3 520 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 CADM4Q8NFZ8 388 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 CYFIP2Q96F07 1278 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 GPR174Q9BXC1 333 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 KCTD10Q9H3F6 313 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 IL21RQ9HBE5 538 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 PCOLCE2Q9UKZ9 415 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 CELSR3Q9NYQ7 3312 aa13.76□□□□□ -0.21
PTPN7-207ENST00000468385 DSPP15924 2871 aaKnown RBP13.75□□□□□ -0.21
PTPN7-207ENST00000468385 MYH10P35580 1976 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 ADAMTS20P59510 1910 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 PLXNB3Q9ULL4 1909 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 HLA-DRAP01903 254 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 TPMTP51580 245 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 ZNF132P52740 706 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 COPAP53621 1224 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 BNC1Q01954 994 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 DCAF12L1Q5VU92 463 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 C19orf48Q6RUI8 117 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 CCDC186Q7Z3E2 898 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 TMPRSS6Q8IU80 811 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 TMC2Q8TDI7 906 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 BACH2Q9BYV9 841 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 APOBEC3GQ9HC16 384 aaKnown RBP13.75□□□□□ -0.21
PTPN7-207ENST00000468385 NAGPAQ9UK23 515 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 ZNF510Q9Y2H8 683 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 USP3Q9Y6I4 520 aa13.75□□□□□ -0.21
PTPN7-207ENST00000468385 METTL12A8MUP2 240 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 IKBKBO14920 756 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 NPC1O15118 1278 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 IGLV3-19P01714 112 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 NR3C1P04150 777 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 ZNF883P0CG24 379 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 CHKAP35790 457 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 PIK3CAP42336 1068 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 PSEN1P49768 467 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 TADA2BQ86TJ2 420 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 RBBP8NLQ8NC74 664 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-207ENST00000468385 BAHD1Q8TBE0 780 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-207ENST00000468385 SIPA1Q96FS4 1042 aa13.74□□□□□ -0.21
PTPN7-207ENST00000468385 PIWIL1Q96J94 861 aaKnown RBP13.74□□□□□ -0.21
PTPN7-207ENST00000468385 NT5C1AQ9BXI3 368 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms