RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 IER2Q9BTL4 223 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 SYNCQ9H7C4 482 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 SPHK2Q9NRA0 654 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 IFNKQ9P0W0 207 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 WDR35Q9P2L0 1181 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 CAPN9O14815 690 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 CBFA2T2O43439 604 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 HSF2BPO75031 334 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 LATS1O95835 1130 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 ERBB2P04626 1255 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 CYP17A1P05093 508 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 IRF1P10914 325 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 EIF2DP41214 584 aaKnown RBP20.9■□□□□ 0.94
NPHP4-206ENST00000468253 HARS2P49590 506 aaKnown RBP20.9■□□□□ 0.94
NPHP4-206ENST00000468253 GALK1P51570 392 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 NOMO3P69849 1222 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 GAD2Q05329 585 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 GRSF1Q12849 480 aaKnown RBP eCLIP20.9■□□□□ 0.94
NPHP4-206ENST00000468253 OR6B2Q6IFH4 312 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 SLC26A9Q7LBE3 791 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 UNC45BQ8IWX7 931 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 DTWD2Q8NBA8 298 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 SYN2Q92777 582 aaPredicted RBP20.9■□□□□ 0.94
NPHP4-206ENST00000468253 CHFRQ96EP1 664 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 SLC2A13Q96QE2 648 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 AGPAT1Q99943 283 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 LMAN1LQ9HAT1 526 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 SFMBT1Q9UHJ3 866 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 STOML2Q9UJZ1 356 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 NAALADL1Q9UQQ1 740 aa20.9■□□□□ 0.94
NPHP4-206ENST00000468253 A0A0A0MRY4 1105 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 HOXC11O43248 304 aaPredicted RBP20.89■□□□□ 0.93
NPHP4-206ENST00000468253 DCNP07585 359 aaKnown RBP20.89■□□□□ 0.93
NPHP4-206ENST00000468253 UNGP13051 313 aaPredicted RBP20.89■□□□□ 0.93
NPHP4-206ENST00000468253 DRD1P21728 446 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 ARID5AQ03989 594 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 LRRC32Q14392 662 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 LY6G5CQ5SRR4 150 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 OLFML1Q6UWY5 402 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 ARCQ7LC44 396 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 CPA5Q8WXQ8 436 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 P2RY13Q9BPV8 354 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 IRX2Q9BZI1 471 aaPredicted RBP20.89■□□□□ 0.93
NPHP4-206ENST00000468253 RRN3Q9NYV6 651 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 MARK1Q9P0L2 795 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 TJP2Q9UDY2 1190 aa20.89■□□□□ 0.93
NPHP4-206ENST00000468253 AGO1Q9UL18 857 aaKnown RBP20.89■□□□□ 0.93
NPHP4-206ENST00000468253 NDRG2Q9UN36 371 aaKnown RBP20.89■□□□□ 0.93
NPHP4-206ENST00000468253 GALR2O43603 387 aaPredicted RBP20.88■□□□□ 0.93
NPHP4-206ENST00000468253 IGLV3-27P01718 113 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 ADH5P11766 374 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 MMP8P22894 467 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 CORO1AP31146 461 aaKnown RBP20.88■□□□□ 0.93
NPHP4-206ENST00000468253 PRKCIP41743 596 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 EIF4EBP2Q13542 120 aaPredicted RBP20.88■□□□□ 0.93
NPHP4-206ENST00000468253 CCINQ13939 588 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 PON2Q15165 354 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 TAF5Q15542 800 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 GAB4Q2WGN9 574 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 PREPLQ4J6C6 727 aaPredicted RBP20.88■□□□□ 0.93
NPHP4-206ENST00000468253 SFMBT2Q5VUG0 894 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 SYPL2Q5VXT5 272 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 NAA35Q5VZE5 725 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 NUGGCQ68CJ6 796 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 FAM183BPQ6ZVS7 135 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 TMEM25Q86YD3 366 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 FAM217AQ8IXS0 508 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 CPXM2Q8N436 756 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 CCDC26Q8TAB7 109 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 DQX1Q8TE96 717 aaKnown RBP20.88■□□□□ 0.93
NPHP4-206ENST00000468253 CD101Q93033 1021 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 SERPINB11Q96P15 392 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 PCDHB18PQ96TA0 734 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 XPO4Q9C0E2 1151 aaKnown RBP20.88■□□□□ 0.93
NPHP4-206ENST00000468253 CAPN11Q9UMQ6 739 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 TLR6Q9Y2C9 796 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 HCN4Q9Y3Q4 1203 aa20.88■□□□□ 0.93
NPHP4-206ENST00000468253 ITIH6Q6UXX5 1313 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 ZNF318Q5VUA4 2279 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 LRRC53A6NM62 1247 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 IGLV3-25P01717 112 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 HMBSP08397 361 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 NOS2P35228 1153 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 TBX4P57082 545 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 CDK17Q00537 523 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 CLEC16AQ2KHT3 1053 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 FBXO43Q4G163 708 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 PPP1R2P3Q6NXS1 205 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 XYLT1Q86Y38 959 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 SLC39A13Q96H72 371 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 SYT11Q9BT88 431 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 IRF2BPLQ9H1B7 796 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 CHRDQ9H2X0 955 aa20.87■□□□□ 0.93
NPHP4-206ENST00000468253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.87■□□□□ 0.93
NPHP4-206ENST00000468253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.86■□□□□ 0.93
NPHP4-206ENST00000468253 SCAMP3O14828 347 aaKnown RBP20.86■□□□□ 0.93
NPHP4-206ENST00000468253 COL9A1P20849 921 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 GBP1P32455 592 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 OPRD1P41143 372 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 MATKP42679 507 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms