RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SULT1E1P49888 294 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 KIF5AQ12840 1032 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 FAM78AQ5JUQ0 283 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 TRNP1Q6NT89 227 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 MTSS1LQ765P7 747 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 TAC4Q86UU9 113 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 CELF5Q8N6W0 485 aaKnown RBP15.86■□□□□ 0.13
SNIP1-202ENST00000468040 SLC35G2Q8TBE7 412 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 E2F7Q96AV8 911 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 PGAP3Q96FM1 320 aaPredicted RBP15.86■□□□□ 0.13
SNIP1-202ENST00000468040 CALR3Q96L12 384 aaKnown RBP15.86■□□□□ 0.13
SNIP1-202ENST00000468040 CFAP57Q96MR6 1250 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 ZNF830Q96NB3 372 aaPredicted RBP15.86■□□□□ 0.13
SNIP1-202ENST00000468040 CNPY3Q9BT09 278 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 KLF16Q9BXK1 252 aaPredicted RBP15.86■□□□□ 0.13
SNIP1-202ENST00000468040 TRPV4Q9HBA0 871 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 ZFP14Q9HCL3 533 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 DDIT4Q9NX09 232 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 SMPD4Q9NXE4 827 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 OBP2AQ9NY56 170 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 SFMBT1Q9UHJ3 866 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 ANAPC7Q9UJX3 599 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 TLR6Q9Y2C9 796 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 CPQQ9Y646 472 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 NUP210Q8TEM1 1887 aaPredicted RBP15.86■□□□□ 0.13
SNIP1-202ENST00000468040 SLC12A8A0AV02 714 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 BTNL10A8MVZ5 291 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 MYO1FO00160 1098 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 PJA2O43164 708 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 IRAK2O43187 625 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 MTA2O94776 668 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 PRAMEF12O95522 483 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 TCF3P15923 654 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 PSMA2P25787 234 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 RDXP35241 583 aaKnown RBP15.85■□□□□ 0.13
SNIP1-202ENST00000468040 TRIP4Q15650 581 aaPredicted RBP15.85■□□□□ 0.13
SNIP1-202ENST00000468040 CCDC14Q49A88 953 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 SND1Q7KZF4 910 aaKnown RBP eCLIP15.85■□□□□ 0.13
SNIP1-202ENST00000468040 STRADAQ7RTN6 431 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 ZDHHC14Q8IZN3 488 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 ADAM32Q8TC27 787 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 USP13Q92995 863 aaPredicted RBP15.85■□□□□ 0.13
SNIP1-202ENST00000468040 PLD4Q96BZ4 506 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 RPGRIP1Q96KN7 1286 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 ZFRQ96KR1 1074 aaKnown RBP15.85■□□□□ 0.13
SNIP1-202ENST00000468040 NCAPGQ9BPX3 1015 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 TSGA10Q9BZW7 698 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 PRKAG3Q9UGI9 489 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 IP6K2Q9UHH9 426 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 PAXBP1Q9Y5B6 917 aa15.85■□□□□ 0.13
SNIP1-202ENST00000468040 C2CD4DB7Z1M9 353 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 MSI1O43347 362 aaKnown RBP15.84■□□□□ 0.13
SNIP1-202ENST00000468040 SLC2A3P11169 496 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 SP100P23497 879 aaPredicted RBP15.84■□□□□ 0.13
SNIP1-202ENST00000468040 NOP2P46087 812 aaKnown RBP15.84■□□□□ 0.13
SNIP1-202ENST00000468040 KCNQ1P51787 676 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 HADHBP55084 474 aaKnown RBP15.84■□□□□ 0.13
SNIP1-202ENST00000468040 PITX1P78337 314 aaPredicted RBP15.84■□□□□ 0.13
SNIP1-202ENST00000468040 ATP11AP98196 1134 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 OGDHQ02218 1023 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 DEUP1Q05D60 604 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 RING1Q06587 406 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 NME3Q13232 169 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 MTA1Q13330 715 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 PIGHQ14442 188 aaPredicted RBP15.84■□□□□ 0.13
SNIP1-202ENST00000468040 ACAP1Q15027 740 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 NUGGCQ68CJ6 796 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 POTEHQ6S545 545 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 KIAA1958Q8N8K9 716 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 SH3RF2Q8TEC5 729 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 ELSPBP1Q96BH3 223 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 TBCBQ99426 244 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 SMG9Q9H0W8 520 aaKnown RBP15.84■□□□□ 0.13
SNIP1-202ENST00000468040 OSGEPQ9NPF4 335 aa15.84■□□□□ 0.13
SNIP1-202ENST00000468040 LSM7Q9UK45 103 aaKnown RBP15.84■□□□□ 0.13
SNIP1-202ENST00000468040 HELZP42694 1942 aaKnown RBP15.84■□□□□ 0.13
SNIP1-202ENST00000468040 DOCK8Q8NF50 2099 aa15.83■□□□□ 0.13
SNIP1-202ENST00000468040 RCCD1A6NED2 376 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 ANHXE9PGG2 379 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 LEFTY2O00292 366 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 CCP110O43303 1012 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 KRT86O43790 486 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 ECI2O75521 394 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 RNF8O76064 485 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 ENDOD1O94919 500 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 IGLV3-27P01718 113 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 FCARP24071 287 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 CCR1P32246 355 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 ARHGAP25P42331 645 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 HARS2P49590 506 aaKnown RBP15.83■□□□□ 0.12
SNIP1-202ENST00000468040 TBX4P57082 545 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 USP4Q13107 963 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 EIF4EBP2Q13542 120 aaPredicted RBP15.83■□□□□ 0.12
SNIP1-202ENST00000468040 CDO1Q16878 200 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 C15orf59Q2T9L4 293 aaPredicted RBP15.83■□□□□ 0.12
SNIP1-202ENST00000468040 OTUD1Q5VV17 481 aaPredicted RBP15.83■□□□□ 0.12
SNIP1-202ENST00000468040 ZNF662Q6ZS27 426 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 BNIPLQ7Z465 357 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 ADHFE1Q8IWW8 467 aa15.83■□□□□ 0.12
SNIP1-202ENST00000468040 UNC45BQ8IWX7 931 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms