RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 CAPN6Q9Y6Q1 641 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 SCINQ9Y6U3 715 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 C2orf78A6NCI8 922 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 KCNU1A8MYU2 1149 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 M0QYT0 321 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 DDX3YO15523 660 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 SART1O43290 800 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 KIF5CO60282 957 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 LRCH4O75427 683 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 TADA3O75528 432 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 TRUB2O95900 331 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 S1PR4O95977 384 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 F9P00740 461 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 LRG1P02750 347 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 TUBB4AP04350 444 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 NCAM1P13591 858 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 HDCP19113 662 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 GPD1P21695 349 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 IL4RP24394 825 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 MIPP30301 263 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 ADRA1BP35368 520 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 PCK1P35558 622 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 CXCR3P49682 368 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 ARSEP51690 589 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 ATXN1P54253 815 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 MLLT6P55198 1093 aaPredicted RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 NAP1L1P55209 391 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 HDAC4P56524 1084 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 NTHL1P78549 312 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 ATP11AP98196 1134 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 IFRD2Q12894 506 aaPredicted RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 PLD1Q13393 1074 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 IFI16Q16666 785 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 BOLA3Q53S33 107 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 HABP4Q5JVS0 413 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 PRSS36Q5K4E3 855 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 DAB2IPQ5VWQ8 1189 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 PAPD7Q5XG87 772 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 BTBD8Q5XKL5 378 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 ANKRD54Q6NXT1 300 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 MSANTD2Q6P1R3 559 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 SYT10Q6XYQ8 523 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 STRADAQ7RTN6 431 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 GRASPQ7Z6J2 395 aaPredicted RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 GPR149Q86SP6 731 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 DAAM2Q86T65 1068 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 ITIH5Q86UX2 942 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 ARHGAP18Q8N392 663 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 TRIM58Q8NG06 486 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 CASP10Q92851 521 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 FBXO32Q969P5 355 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 WBP2Q969T9 261 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 TCEAL4Q96EI5 215 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 SLC39A13Q96H72 371 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 ZSWIM3Q96MP5 696 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 MCEEQ96PE7 176 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 SLC22A12Q96S37 553 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 TBCBQ99426 244 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 CDX2Q99626 313 aaPredicted RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 CORO1BQ9BR76 489 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 KLF16Q9BXK1 252 aaPredicted RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 CCSER2Q9H7U1 834 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 WDR6Q9NNW5 1121 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 TLR8Q9NR97 1041 aaKnown RBP6.21□□□□□ -1.42
USP39-213ENST00000467885 EHD2Q9NZN4 543 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 TRPM5Q9NZQ8 1165 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 SFMBT1Q9UHJ3 866 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 DPP7Q9UHL4 492 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 ANAPC7Q9UJX3 599 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 JRKLQ9Y4A0 524 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 VWA8A3KMH1 1905 aa6.21□□□□□ -1.42
USP39-213ENST00000467885 FAM187AA6NFU0 413 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 SOBPA7XYQ1 873 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 TMEM110-MUSTN1A8MSY1 372 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 ENC1O14682 589 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 CAPN9O14815 690 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 COCHO43405 550 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 NCK2O43639 380 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 GDF9O60383 454 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 GREM1O60565 184 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 DAB1O75553 588 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 RNF8O76064 485 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 OLFM2O95897 454 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 FTCDO95954 541 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 OAS1P00973 400 aaKnown RBP6.2□□□□□ -1.42
USP39-213ENST00000467885 KLKB1P03952 638 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 RHOP08100 348 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 RARAP10276 462 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 PYGMP11217 842 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 MYL4P12829 197 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 TNNT1P13805 278 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 GJA1P17302 382 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 HOXB8P17481 243 aaPredicted RBP6.2□□□□□ -1.42
USP39-213ENST00000467885 PSMA2P25787 234 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 CTNNA2P26232 953 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 GABRR2P28476 465 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 SDC4P31431 198 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 MAN1A1P33908 653 aa6.2□□□□□ -1.42
USP39-213ENST00000467885 ATP5C1P36542 298 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms