RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 NFIL3Q16649 462 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 CCDC186Q7Z3E2 898 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 RABEPKQ7Z6M1 372 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 SCD5Q86SK9 330 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 GABRG3Q99928 467 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 DUSP16Q9BY84 665 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 CD248Q9HCU0 757 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 FSCN3Q9NQT6 498 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 CACNA2D2Q9NY47 1150 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 PLK2Q9NYY3 685 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 WASF3Q9UPY6 502 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 RAD54BQ9Y620 910 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 STC2O76061 302 aa18.15■□□□□ 0.5
TRIM56-203ENST00000467847 TOP3BO95985 862 aaKnown RBP18.15■□□□□ 0.5
TRIM56-203ENST00000467847 SERPINF2P08697 491 aa18.15■□□□□ 0.5
TRIM56-203ENST00000467847 CISD3P0C7P0 127 aa18.15■□□□□ 0.5
TRIM56-203ENST00000467847 RALAP11233 206 aa18.15■□□□□ 0.5
TRIM56-203ENST00000467847 RPL13P26373 211 aaKnown RBP18.15■□□□□ 0.5
TRIM56-203ENST00000467847 NDUFA8P51970 172 aa18.15■□□□□ 0.5
TRIM56-203ENST00000467847 ZNF394Q53GI3 561 aa18.15■□□□□ 0.5
TRIM56-203ENST00000467847 PPP1R26Q5T8A7 1209 aaPredicted RBP18.15■□□□□ 0.5
TRIM56-203ENST00000467847 HDDC3Q8N4P3 179 aa18.15■□□□□ 0.5
TRIM56-203ENST00000467847 HEXIM2Q96MH2 286 aaKnown RBP18.15■□□□□ 0.5
TRIM56-203ENST00000467847 CDK5RAP1Q96SZ6 601 aaKnown RBP18.15■□□□□ 0.5
TRIM56-203ENST00000467847 AKAP13Q12802 2813 aa18.15■□□□□ 0.5
TRIM56-203ENST00000467847 PCDH15Q96QU1 1955 aa18.15■□□□□ 0.5
TRIM56-203ENST00000467847 KRT85P78386 507 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 ENPEPQ07075 957 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 DPYDQ12882 1025 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 ADAM9Q13443 819 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 SLC41A1Q8IVJ1 513 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 GUF1Q8N442 669 aaKnown RBP18.14■□□□□ 0.49
TRIM56-203ENST00000467847 TRIML1Q8N9V2 468 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 MRGPRX1Q96LB2 322 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 HSPA12BQ96MM6 686 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 SCNM1Q9BWG6 230 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 SLC6A17Q9H1V8 727 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 CAPN10Q9HC96 672 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 TMEM8AQ9HCN3 771 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 CLIC5Q9NZA1 410 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 RASAL2Q9UJF2 1139 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 LHX6Q9UPM6 363 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 ZNF510Q9Y2H8 683 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 USP3Q9Y6I4 520 aa18.14■□□□□ 0.49
TRIM56-203ENST00000467847 SRRM3A6NNA2 597 aaPredicted RBP18.13■□□□□ 0.49
TRIM56-203ENST00000467847 GFRA2O00451 464 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 NDUFS2O75306 463 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 KLKB1P03952 638 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 HMBSP08397 361 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 GTF2H1P32780 548 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 COG7P83436 770 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 SEMA3BQ13214 749 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 KRT39Q6A163 491 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 KIAA1324Q6UXG2 1013 aaKnown RBP18.13■□□□□ 0.49
TRIM56-203ENST00000467847 PIP4P1Q86T03 277 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 ZNF276Q8N554 614 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 ZCCHC14Q8WYQ9 949 aaKnown RBP18.13■□□□□ 0.49
TRIM56-203ENST00000467847 CD93Q9NPY3 652 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 FBXO10Q9UK96 956 aa18.13■□□□□ 0.49
TRIM56-203ENST00000467847 FAM237AA0A1B0GTK4 181 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 SPAARA0A1B0GVQ0 90 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 UPK3BL1B0FP48 263 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 WASH3PC4AMC7 463 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 UPK3BL2E5RIL1 263 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 OPHN1O60890 802 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 PENKP01210 267 aaPredicted RBP18.12■□□□□ 0.49
TRIM56-203ENST00000467847 CORO1AP31146 461 aaKnown RBP18.12■□□□□ 0.49
TRIM56-203ENST00000467847 CHKAP35790 457 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 SIM1P81133 766 aaPredicted RBP18.12■□□□□ 0.49
TRIM56-203ENST00000467847 EFEMP1Q12805 493 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 STARD3Q14849 445 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 FYB2Q5VWT5 728 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 LRSAM1Q6UWE0 723 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 KRBA2Q6ZNG9 492 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 ARHGAP18Q8N392 663 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 TTC39CQ8N584 583 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 MINDY1Q8N5J2 469 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 SEMA4DQ92854 862 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 P2RY11Q96G91 374 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 DCLK3Q9C098 648 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 CISHQ9NSE2 258 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 SLC27A6Q9Y2P4 619 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 STON1Q9Y6Q2 735 aa18.12■□□□□ 0.49
TRIM56-203ENST00000467847 WDFY3Q8IZQ1 3526 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 A0A1W2PQD8 194 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 ARHGAP33O14559 1287 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 SYPP08247 313 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 MXI1P50539 228 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 ZCWPW2Q504Y3 356 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 SYCP2LQ5T4T6 812 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 RSRC2Q7L4I2 434 aaKnown RBP18.11■□□□□ 0.49
TRIM56-203ENST00000467847 RGL4Q8IZJ4 473 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 FBXL13Q8NEE6 735 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 OR2I1PQ8NGU4 316 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 EEF2KMTQ96G04 330 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 TMEM176AQ96HP8 235 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 ZNF419Q96HQ0 510 aaPredicted RBP18.11■□□□□ 0.49
TRIM56-203ENST00000467847 FAXDC2Q96IV6 333 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 ARID3AQ99856 593 aa18.11■□□□□ 0.49
TRIM56-203ENST00000467847 STRIP2Q9ULQ0 834 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms