RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 RGS19P49795 217 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 ZNF81P51508 661 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 SSBP2P81877 361 aaPredicted RBP4.39□□□□□ -1.71
VPS50-209ENST00000467326 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 MAPRE1Q15691 268 aaKnown RBP4.39□□□□□ -1.71
VPS50-209ENST00000467326 FAXCQ5TGI0 409 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 ABLIM2Q6H8Q1 611 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 MRNIPQ6NTE8 343 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 SLC2A7Q6PXP3 512 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 VSTM1Q6UX27 236 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 ZNF813Q6ZN06 617 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 C1QL2Q7Z5L3 287 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 CCDC28AQ8IWP9 274 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 CCDC150Q8NCX0 1101 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 SMG7Q92540 1137 aaKnown RBP4.39□□□□□ -1.71
VPS50-209ENST00000467326 ARPC5LQ9BPX5 153 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 FAM118BQ9BPY3 351 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 C1QTNF7Q9BXJ2 289 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 NAA15Q9BXJ9 866 aaKnown RBP4.39□□□□□ -1.71
VPS50-209ENST00000467326 PRSS22Q9GZN4 317 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 USP29Q9HBJ7 922 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 WDR17Q8IZU2 1322 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 FER1L4A9Z1Z3 1794 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 SMIM35A0A1B0GVV1 85 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 RASA4BC9J798 803 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 PROB1E7EW31 1015 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 H3BNC9 293 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 RASA4O43374 803 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 CA12O43570 354 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 TNFSF4P23510 183 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 SLC5A2P31639 672 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 COPB2P35606 906 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 TM4SF4P48230 202 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 GPC5P78333 572 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 CFHR3Q02985 330 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 CCDC15Q0P6D6 951 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 KLF9Q13886 244 aaPredicted RBP4.38□□□□□ -1.71
VPS50-209ENST00000467326 ACOX1Q15067 660 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 CC2D1BQ5T0F9 858 aaKnown RBP4.38□□□□□ -1.71
VPS50-209ENST00000467326 CCDC174Q6PII3 467 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 C12orf76Q8N812 135 aaPredicted RBP4.38□□□□□ -1.71
VPS50-209ENST00000467326 OSR1Q8TAX0 266 aaPredicted RBP4.38□□□□□ -1.71
VPS50-209ENST00000467326 HIC2Q96JB3 615 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 ZNF778Q96MU6 729 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 WDR24Q96S15 920 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 CINPQ9BW66 212 aaPredicted RBP4.38□□□□□ -1.71
VPS50-209ENST00000467326 GJB4Q9NTQ9 266 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 GAR1Q9NY12 217 aaKnown RBP4.38□□□□□ -1.71
VPS50-209ENST00000467326 MAP3K20Q9NYL2 800 aaKnown RBP4.38□□□□□ -1.71
VPS50-209ENST00000467326 TMOD4Q9NZQ9 345 aa4.38□□□□□ -1.71
VPS50-209ENST00000467326 SCAF8Q9UPN6 1271 aaKnown RBP4.38□□□□□ -1.71
VPS50-209ENST00000467326 COL3A1P02461 1466 aaPredicted RBP4.37□□□□□ -1.71
VPS50-209ENST00000467326 KCNU1A8MYU2 1149 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 DSCR3O14972 297 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 KCNQ3O43525 872 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 NCK2O43639 380 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 PRAMEF2O60811 474 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 COQ9O75208 318 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 BCAR3O75815 825 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 NDST3O95803 873 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 HARSP12081 509 aaKnown RBP4.37□□□□□ -1.71
VPS50-209ENST00000467326 DRD1P21728 446 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 TRAPPC10P48553 1259 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 DGKQP52824 942 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 POU5F1Q01860 360 aaKnown RBP4.37□□□□□ -1.71
VPS50-209ENST00000467326 MTAPQ13126 283 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 ETFDHQ16134 617 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 SLC5A9Q2M3M2 681 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 SLC35G1Q2M3R5 365 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 AASDHQ4L235 1098 aaPredicted RBP4.37□□□□□ -1.71
VPS50-209ENST00000467326 GRHL2Q6ISB3 625 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 HIBCHQ6NVY1 386 aaPredicted RBP4.37□□□□□ -1.71
VPS50-209ENST00000467326 DPP9Q86TI2 863 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 TXLNBQ8N3L3 684 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 OR2C3Q8N628 320 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 FAM71DQ8N9W8 422 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 TEX19Q8NA77 164 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 SUN3Q8TAQ9 357 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 ABHD5Q8WTS1 349 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 RPL36ALQ969Q0 106 aaKnown RBP4.37□□□□□ -1.71
VPS50-209ENST00000467326 SNX27Q96L92 541 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 EIF2AQ9BY44 585 aaKnown RBP4.37□□□□□ -1.71
VPS50-209ENST00000467326 PCDHAC1Q9H158 963 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 FZD4Q9ULV1 537 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 MAFFQ9ULX9 164 aa4.37□□□□□ -1.71
VPS50-209ENST00000467326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.36□□□□□ -1.71
VPS50-209ENST00000467326 E5RJQ4 531 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 CLIC1O00299 241 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 TCERG1O14776 1098 aaKnown RBP4.36□□□□□ -1.71
VPS50-209ENST00000467326 FYB1O15117 783 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 TP73O15350 636 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 CBFA2T3O75081 653 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 IFIT2P09913 472 aaKnown RBP4.36□□□□□ -1.71
VPS50-209ENST00000467326 TMIGD3P0DMS9 266 aaPredicted RBP4.36□□□□□ -1.71
VPS50-209ENST00000467326 EGR1P18146 543 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 SFPQP23246 707 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS50-209ENST00000467326 GABRB3P28472 473 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 GALNSP34059 522 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 PBX1P40424 430 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 JAK3P52333 1124 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms