RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 TRNAU1APQ9NX07 287 aaKnown RBP16.03■□□□□ 0.16
ABCF3-206ENST00000466742 PCDHGB4Q9UN71 923 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 PCDHGB5Q9Y5G0 923 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 SNX9Q9Y5X1 595 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 MAD1L1Q9Y6D9 718 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 MYH11P35749 1972 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 CYP26A1O43174 497 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 KDM1AO60341 852 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 FAM58BPP0C7Q3 252 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 ZNF23P17027 643 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 SEPT6Q14141 434 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 GRAMD1BQ3KR37 738 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 GRK7Q8WTQ7 553 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 DCUN1D1Q96GG9 259 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 RANBP9Q96S59 729 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 PTPN18Q99952 460 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 SH3GL1Q99961 368 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 SH2D3AQ9BRG2 576 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 QPCTLQ9NXS2 382 aa16.03■□□□□ 0.16
ABCF3-206ENST00000466742 WDR91A4D1P6 747 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 ASB14A6NK59 587 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 POC1B-GALNT4F8VUJ3 575 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 K7EPI3 171 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 SLC16A3O15427 465 aaKnown RBP16.02■□□□□ 0.16
ABCF3-206ENST00000466742 CRTAMO95727 393 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 NR3C1P04150 777 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 SRGAP2CP0DJJ0 459 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 SRGAP2BP0DMP2 458 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 HMOX2P30519 316 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 CPOXP36551 454 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 HUNKP57058 714 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 PAOXQ6QHF9 649 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 LPCAT2Q7L5N7 544 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 ALYREFQ86V81 257 aaKnown RBP16.02■□□□□ 0.16
ABCF3-206ENST00000466742 KSR1Q8IVT5 923 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 ARMC7Q9H6L4 198 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 LIN28AQ9H9Z2 209 aaKnown RBP16.02■□□□□ 0.16
ABCF3-206ENST00000466742 ZNF302Q9NR11 478 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 SLC24A2Q9UI40 661 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 INPP5FQ9Y2H2 1132 aa16.02■□□□□ 0.16
ABCF3-206ENST00000466742 GSTTP1A0A1W2PQM5 241 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 DGAT1O75907 488 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 ADCY8P40145 1251 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 ALDH1A3P47895 512 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 ZNF200P98182 395 aaPredicted RBP16.02■□□□□ 0.15
ABCF3-206ENST00000466742 CYTH1Q15438 398 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 SEPT7Q16181 437 aaKnown RBP16.02■□□□□ 0.15
ABCF3-206ENST00000466742 SGO2Q562F6 1265 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 GJB7Q6PEY0 223 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 IYDQ6PHW0 289 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 PPM1KQ8N3J5 372 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 LSM14AQ8ND56 463 aaKnown RBP16.02■□□□□ 0.15
ABCF3-206ENST00000466742 C1orf54Q8WWF1 131 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 PLEKHA8Q96JA3 519 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 HAUS8Q9BT25 410 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 PDLIM7Q9NR12 457 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 CYP26B1Q9NR63 512 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 TAS2R14Q9NYV8 317 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 APPL1Q9UKG1 709 aa16.02■□□□□ 0.15
ABCF3-206ENST00000466742 GTPBP10A4D1E9 387 aaKnown RBP16.01■□□□□ 0.15
ABCF3-206ENST00000466742 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 H3BNX3 289 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 K7ENM7 598 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 KRT4P19013 534 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 KDSRQ06136 332 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 PSMD6Q15008 389 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 EFTUD2Q15029 972 aaKnown RBP eCLIP16.01■□□□□ 0.151e-16■■■■■ 32.5
ABCF3-206ENST00000466742 FAM110CQ1W6H9 321 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 ZNF792Q3KQV3 632 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 DCAF6Q58WW2 860 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 EEPD1Q7L9B9 569 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 CHSY1Q86X52 802 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 MCPH1Q8NEM0 835 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 PTCD2Q8WV60 388 aaKnown RBP16.01■□□□□ 0.15
ABCF3-206ENST00000466742 KCNK4Q9NYG8 393 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 SOX13Q9UN79 622 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 SQORQ9Y6N5 450 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 C2orf71A6NGG8 1288 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 DLATP10515 647 aaKnown RBP16.01■□□□□ 0.15
ABCF3-206ENST00000466742 RAG1P15918 1043 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 TNFAIP3P21580 790 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 PRDX6P30041 224 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 GTF2BQ00403 316 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 NSUN2Q08J23 767 aaKnown RBP eCLIP16.01■□□□□ 0.15
ABCF3-206ENST00000466742 FAM102BQ5T8I3 360 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 CYP4F22Q6NT55 531 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 TRMT1LQ7Z2T5 733 aaKnown RBP16.01■□□□□ 0.15
ABCF3-206ENST00000466742 TMEM174Q8WUU8 243 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 SEPT1Q8WYJ6 367 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 USP6NLQ92738 828 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 CCDC106Q9BWC9 280 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 TMEM206Q9H813 350 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 CLK4Q9HAZ1 481 aaKnown RBP16.01■□□□□ 0.15
ABCF3-206ENST00000466742 VTA1Q9NP79 307 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 GPRC5CQ9NQ84 441 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 SEPT9Q9UHD8 586 aaPredicted RBP16.01■□□□□ 0.15
ABCF3-206ENST00000466742 AP4B1Q9Y6B7 739 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 KIAA1217Q5T5P2 1943 aa16.01■□□□□ 0.15
ABCF3-206ENST00000466742 PFDN6O15212 129 aa16■□□□□ 0.15
ABCF3-206ENST00000466742 ARIH2O95376 493 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms