RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CDK5RAP1Q96SZ6 601 aaKnown RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 C11orf70Q9BRQ4 267 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 HAUS4Q9H6D7 363 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 C8orf33Q9H7E9 229 aaPredicted RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 OLA1Q9NTK5 396 aaKnown RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 RBM12Q9NTZ6 932 aaKnown RBP12.18□□□□□ -0.46
CUX1-207ENST00000465461 TAS2R14Q9NYV8 317 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 SIT1Q9Y3P8 196 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 MYOFQ9NZM1 2061 aa12.18□□□□□ -0.46
CUX1-207ENST00000465461 SYNJ2BP-COX16A0A087WUM0 186 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 GOLGA6L7A0A1B0GV03 622 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 TMCO5BA8MYB1 307 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 SLC9A3R1O14745 358 aaPredicted RBP12.17□□□□□ -0.46
CUX1-207ENST00000465461 LSM8O95777 96 aaKnown RBP12.17□□□□□ -0.46
CUX1-207ENST00000465461 GYPCP04921 128 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 UNGP13051 313 aaPredicted RBP12.17□□□□□ -0.46
CUX1-207ENST00000465461 AOC1P19801 751 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 TNFAIP3P21580 790 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 CASP14P31944 242 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 GABRB2P47870 512 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 GALK1P51570 392 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 COG7P83436 770 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 CLEC16AQ2KHT3 1053 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 ANO4Q32M45 955 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 DCAF6Q58WW2 860 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 FIGNQ5HY92 759 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 MSANTD2Q6P1R3 559 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 ZNF571Q7Z3V5 609 aaPredicted RBP12.17□□□□□ -0.46
CUX1-207ENST00000465461 C12orf40Q86WS4 652 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 RALGPS2Q86X27 583 aaPredicted RBP12.17□□□□□ -0.46
CUX1-207ENST00000465461 CCDC105Q8IYK2 499 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 NAT16Q8N8M0 369 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 NUP58Q9BVL2 599 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 LMAN1LQ9HAT1 526 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 POPDC2Q9HBU9 364 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 AIPL1Q9NZN9 384 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 COX16Q9P0S2 106 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 TBC1D14Q9P2M4 693 aa12.17□□□□□ -0.46
CUX1-207ENST00000465461 LSM7Q9UK45 103 aaKnown RBP12.17□□□□□ -0.46
CUX1-207ENST00000465461 AGO1Q9UL18 857 aaKnown RBP12.17□□□□□ -0.46
CUX1-207ENST00000465461 MAN2B1O00754 1011 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 TRIM24O15164 1050 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 SART1O43290 800 aaKnown RBP12.16□□□□□ -0.46
CUX1-207ENST00000465461 CBFA2T2O43439 604 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 NFATC1O95644 943 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 PLEKP08567 350 aaPredicted RBP12.16□□□□□ -0.46
CUX1-207ENST00000465461 ADH5P11766 374 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 TFE3P19532 575 aaPredicted RBP12.16□□□□□ -0.46
CUX1-207ENST00000465461 CLCN5P51795 746 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 TBX4P57082 545 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 KLHL30Q0D2K2 578 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 MESP2Q0VG99 397 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 PTP4A2Q12974 167 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
CUX1-207ENST00000465461 EFHC1Q5JVL4 640 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 FAM102AQ5T9C2 384 aaPredicted RBP12.16□□□□□ -0.46
CUX1-207ENST00000465461 FSTL4Q6MZW2 842 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 TRNP1Q6NT89 227 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 SFTPA1Q8IWL2 248 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 SLC2A13Q96QE2 648 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 SYT11Q9BT88 431 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 ADAM33Q9BZ11 813 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 EDEM3Q9BZQ6 932 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 SPHK2Q9NRA0 654 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 METTL5Q9NRN9 209 aaKnown RBP12.16□□□□□ -0.46
CUX1-207ENST00000465461 PLK2Q9NYY3 685 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 CALCOCO1Q9P1Z2 691 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 MYO6Q9UM54 1294 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 CAPN11Q9UMQ6 739 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 KMT2EQ8IZD2 1858 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 TRIOO75962 3097 aa12.16□□□□□ -0.46
CUX1-207ENST00000465461 A0A1W2PQJ5 194 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 NEDD8-MDP1E9PL57 170 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 TSPAN3O60637 253 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 HSF2BPO75031 334 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 DAB1O75553 588 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 TRUB2O95900 331 aaKnown RBP12.15□□□□□ -0.46
CUX1-207ENST00000465461 MOCS2O96007 188 aaPredicted RBP12.15□□□□□ -0.46
CUX1-207ENST00000465461 EGFP01133 1207 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 CCDC172P0C7W6 258 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 CHRNB1P11230 501 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 MMP8P22894 467 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 OPRD1P41143 372 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 SNX16P57768 344 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 ZBED6P86452 979 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 NR1H3Q13133 447 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 NME3Q13232 169 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 ZC3H12AQ5D1E8 599 aaKnown RBP12.15□□□□□ -0.46
CUX1-207ENST00000465461 TRIM72Q6ZMU5 477 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 Q6ZS52 159 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 TOGARAM2Q6ZUX3 1019 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 SLC26A9Q7LBE3 791 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 VSTM4Q8IW00 320 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 EMC1Q8N766 993 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 EZH1Q92800 747 aaPredicted RBP12.15□□□□□ -0.46
CUX1-207ENST00000465461 PLD4Q96BZ4 506 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 FCRL2Q96LA5 508 aaPredicted RBP12.15□□□□□ -0.46
CUX1-207ENST00000465461 P2RY13Q9BPV8 354 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 TRIM5Q9C035 493 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms