RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 CLEC4CQ8WTT0 213 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 TRIM5Q9C035 493 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 RBSNQ9H1K0 784 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 ECT2Q9H8V3 914 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 C11orf16Q9NQ32 467 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 HPS4Q9NQG7 708 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 MARK1Q9P0L2 795 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 RASAL2Q9UJF2 1139 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 STAP1Q9ULZ2 295 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 PAXBP1Q9Y5B6 917 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 KANSL1LA0AUZ9 987 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 KRBA1A5PL33 1030 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 HOXC11O43248 304 aaPredicted RBP14.3□□□□□ -0.12
LIMD1-203ENST00000465039 NOS2P35228 1153 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 MATKP42679 507 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 CDK17Q00537 523 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 PREPLQ4J6C6 727 aaPredicted RBP14.3□□□□□ -0.12
LIMD1-203ENST00000465039 ADGRG2Q8IZP9 1017 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 CPXM2Q8N436 756 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 C3orf20Q8ND61 904 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 OR8K1Q8NGG5 319 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 CCDC26Q8TAB7 109 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 DQX1Q8TE96 717 aaKnown RBP14.3□□□□□ -0.12
LIMD1-203ENST00000465039 EDEM1Q92611 657 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 NT5C3BQ969T7 300 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 TRIM11Q96F44 468 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 PGAP3Q96FM1 320 aaPredicted RBP14.3□□□□□ -0.12
LIMD1-203ENST00000465039 MFSD1Q9H3U5 465 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 HAUS4Q9H6D7 363 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 HEBP1Q9NRV9 189 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 WNT6Q9Y6F9 365 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 ZNF318Q5VUA4 2279 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 COL4A3Q01955 1670 aa14.3□□□□□ -0.12
LIMD1-203ENST00000465039 SLC12A8A0AV02 714 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.29□□□□□ -0.12
LIMD1-203ENST00000465039 SPECC1L-ADORA2AF8WAN1 911 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 NCAM2O15394 837 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 IRAK2O43187 625 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 F9P00740 461 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 MYBL1P10243 752 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 AOC1P19801 751 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 TNFAIP3P21580 790 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 CASP14P31944 242 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 GBP1P32455 592 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 EIF4EBP2Q13542 120 aaPredicted RBP14.29□□□□□ -0.12
LIMD1-203ENST00000465039 E4F1Q66K89 784 aaPredicted RBP14.29□□□□□ -0.12
LIMD1-203ENST00000465039 HGSNATQ68CP4 663 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 OR6B2Q6IFH4 312 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 MMS22LQ6ZRQ5 1243 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 TPRG1Q6ZUI0 275 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 MON1BQ7L1V2 547 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 SYNPOQ8N3V7 929 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 OLIG1Q8TAK6 271 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 CPA5Q8WXQ8 436 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 NDRG1Q92597 394 aaKnown RBP14.29□□□□□ -0.12
LIMD1-203ENST00000465039 PBXIP1Q96AQ6 731 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 SLC39A13Q96H72 371 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 PIWIL1Q96J94 861 aaKnown RBP14.29□□□□□ -0.12
LIMD1-203ENST00000465039 ZFYVE19Q96K21 471 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 PCDHB18PQ96TA0 734 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 DDX50Q9BQ39 737 aaKnown RBP14.29□□□□□ -0.12
LIMD1-203ENST00000465039 EBF3Q9H4W6 596 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 TBC1D17Q9HA65 648 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 ZNHIT6Q9NWK9 470 aaKnown RBP14.29□□□□□ -0.12
LIMD1-203ENST00000465039 GTSE1Q9NYZ3 720 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 ADAM22Q9P0K1 906 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 CA14Q9ULX7 337 aa14.29□□□□□ -0.12
LIMD1-203ENST00000465039 SSU72P8A0A1W2PR75 194 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 PIK3R2O00459 728 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 TRDMT1O14717 391 aaKnown RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 MDM4O15151 490 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 MFAP3LO75121 409 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 TRUB2O95900 331 aaKnown RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 CYP17A1P05093 508 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 CORO1AP31146 461 aaKnown RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 RPS9P46781 194 aaKnown RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 SLC11A2P49281 568 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 TBX4P57082 545 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 GAD2Q05329 585 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 TNK2Q07912 1038 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 PTP4A2Q12974 167 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 TBX2Q13207 712 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 PPP2R5DQ14738 602 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 DHCR24Q15392 516 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 TSR1Q2NL82 804 aaKnown RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 SLC25A52Q3SY17 297 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 DCAF6Q58WW2 860 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 MPP7Q5T2T1 576 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 FAM102AQ5T9C2 384 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 ACAD10Q6JQN1 1059 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 ZNF571Q7Z3V5 609 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 GAS2L3Q86XJ1 694 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 BBS7Q8IWZ6 715 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 ZNF557Q8N988 423 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 ST13P5Q8NFI4 369 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 PJA1Q8NG27 643 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 SLC30A5Q8TAD4 765 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 CLDN23Q96B33 292 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 PRRX2Q99811 253 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms