RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 ARNTLO00327 626 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 ZNF263O14978 683 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 DCXO43602 365 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 SRFP11831 508 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
APTX-213ENST00000465003 ATP11AP98196 1134 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 C15orf59Q2T9L4 293 aaPredicted RBP12.39□□□□□ -0.43
APTX-213ENST00000465003 TPGS1Q6ZTW0 290 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 SLC26A9Q7LBE3 791 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 PHF13Q86YI8 300 aaPredicted RBP12.39□□□□□ -0.43
APTX-213ENST00000465003 DENND1CQ8IV53 801 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 CNGA4Q8IV77 575 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 IQCDQ96DY2 449 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 MCEEQ96PE7 176 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 TMPRSS4Q9NRS4 437 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 FBXL21Q9UKT6 434 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 COL4A2P08572 1712 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 KRBA1A5PL33 1030 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 SOWAHDA6NJG2 315 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 HSF2BPO75031 334 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 TRUB2O95900 331 aaKnown RBP12.39□□□□□ -0.43
APTX-213ENST00000465003 HNRNPH3P31942 346 aaKnown RBP12.39□□□□□ -0.43
APTX-213ENST00000465003 ZXDAP98168 799 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 ZNF268Q14587 947 aaPredicted RBP12.39□□□□□ -0.43
APTX-213ENST00000465003 DAB2IPQ5VWQ8 1189 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 SIX5Q8N196 739 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 SLC2A13Q96QE2 648 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 FAM83CQ9BQN1 747 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 THAP2Q9H0W7 228 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 FAM204AQ9H8W3 233 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 NHEJ1Q9H9Q4 299 aaPredicted RBP12.39□□□□□ -0.43
APTX-213ENST00000465003 DDIT4Q9NX09 232 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 PLK2Q9NYY3 685 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 TMEM59LQ9UK28 342 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 TFR2Q9UP52 801 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 CUL9Q8IWT3 2517 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 MYO15AQ9UKN7 3530 aa12.39□□□□□ -0.43
APTX-213ENST00000465003 GOLGA6L7A0A1B0GV03 622 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 SART1O43290 800 aaKnown RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 DAB1O75553 588 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 RFC1P35251 1148 aaPredicted RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 NUMBP49757 651 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 SULT1E1P49888 294 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 EML3Q32P44 896 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 ZC3H12AQ5D1E8 599 aaKnown RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 EFHC1Q5JVL4 640 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 CCDC122Q5T0U0 273 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 KLHDC10Q6PID8 442 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 MSANTD4Q8NCY6 345 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 DEPDC1BQ8WUY9 529 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 OSCP1Q8WVF1 389 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 CHFRQ96EP1 664 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 TBCBQ99426 244 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 SELENOOQ9BVL4 669 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 KIF9Q9HAQ2 790 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 ZNHIT6Q9NWK9 470 aaKnown RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 STRIP2Q9ULQ0 834 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 VPS13AQ96RL7 3174 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 ANTXRLA6NF34 631 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 M0QYT0 321 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 CHADO15335 359 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 AKR1B10O60218 316 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 KRT3P12035 628 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 IFNAR2P48551 515 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 OGDHQ02218 1023 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 ASTE1Q2TB18 679 aaPredicted RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 DNAJC24Q6P3W2 148 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 ALKBH5Q6P6C2 394 aaKnown RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 TXNDC11Q6PKC3 985 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 TADA2BQ86TJ2 420 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 NXPE3Q969Y0 559 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 ARHGEF26Q96DR7 871 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 ANLNQ9NQW6 1124 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 OLA1Q9NTK5 396 aaKnown RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 PIGVQ9NUD9 493 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 CNOT8Q9UFF9 292 aaKnown RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 ZMYM5Q9UJ78 669 aa12.38□□□□□ -0.43
APTX-213ENST00000465003 AGO1Q9UL18 857 aaKnown RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 BZW2Q9Y6E2 419 aaKnown RBP12.38□□□□□ -0.43
APTX-213ENST00000465003 MIA3Q5JRA6 1907 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 TCRBV5S1A1TA0A578 114 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 DLL1O00548 723 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 TSPAN3O60637 253 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 CALB1P05937 261 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 WEE1P30291 646 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 MATKP42679 507 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 TBX4P57082 545 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 MESP2Q0VG99 397 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 MSANTD2Q6P1R3 559 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 RFWD3Q6PCD5 774 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 TPRG1Q6ZUI0 275 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 VPS36Q86VN1 386 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 C12orf40Q86WS4 652 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 NAT16Q8N8M0 369 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 C3orf20Q8ND61 904 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 RXFP2Q8WXD0 754 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 IRF7Q92985 503 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms