RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SLC2A13Q96QE2 648 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 KCNH6Q9H252 994 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 LMAN1LQ9HAT1 526 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 SPHK2Q9NRA0 654 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 ASNSD1Q9NWL6 643 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 AGO1Q9UL18 857 aaKnown RBP18.48■□□□□ 0.55
VPS52-214ENST00000463486 MYO6Q9UM54 1294 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 HBS1LQ9Y450 684 aaKnown RBP18.48■□□□□ 0.55
VPS52-214ENST00000463486 MIA3Q5JRA6 1907 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 MSI1O43347 362 aaKnown RBP18.47■□□□□ 0.55
VPS52-214ENST00000463486 IGLV3-25P01717 112 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 GLI1P08151 1106 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 HMBSP08397 361 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 UNGP13051 313 aaPredicted RBP18.47■□□□□ 0.55
VPS52-214ENST00000463486 NCAM1P13591 858 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 CORO1AP31146 461 aaKnown RBP18.47■□□□□ 0.55
VPS52-214ENST00000463486 SLC6A11P48066 632 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 TPM4P67936 248 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 PITX1P78337 314 aaPredicted RBP18.47■□□□□ 0.55
VPS52-214ENST00000463486 NR1H3Q13133 447 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 FIGNQ5HY92 759 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 MAMSTRQ6ZN01 415 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 C12orf40Q86WS4 652 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 ETFBKMTQ8IXQ9 262 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 FAM217AQ8IXS0 508 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 PHTF2Q8N3S3 785 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 CPA5Q8WXQ8 436 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 PLD4Q96BZ4 506 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 NOX5Q96PH1 765 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 P2RY13Q9BPV8 354 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 EDEM3Q9BZQ6 932 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 POPDC2Q9HBU9 364 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 RBM12Q9NTZ6 932 aaKnown RBP18.47■□□□□ 0.55
VPS52-214ENST00000463486 MARK1Q9P0L2 795 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 IFNKQ9P0W0 207 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 STOML2Q9UJZ1 356 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 STRIP2Q9ULQ0 834 aa18.47■□□□□ 0.55
VPS52-214ENST00000463486 ARIH1Q9Y4X5 557 aaPredicted RBP18.47■□□□□ 0.55
VPS52-214ENST00000463486 WDR87Q6ZQQ6 2873 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 HOXC11O43248 304 aaPredicted RBP18.46■□□□□ 0.55
VPS52-214ENST00000463486 CHRM1P11229 460 aaPredicted RBP18.46■□□□□ 0.55
VPS52-214ENST00000463486 SLC6A3Q01959 620 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 ARID5AQ03989 594 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 GOLGA8FQ08AF8 430 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 GOLGA8DPQ0D2H9 430 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 PTP4A2Q12974 167 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 C2CD6Q53TS8 623 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 NAA35Q5VZE5 725 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 SLC26A9Q7LBE3 791 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 CACNA2D4Q7Z3S7 1137 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 XYLT1Q86Y38 959 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 ZNF397Q8NF99 534 aaPredicted RBP18.46■□□□□ 0.55
VPS52-214ENST00000463486 SLC39A13Q96H72 371 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 DCLK3Q9C098 648 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 CHRDQ9H2X0 955 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 AIPL1Q9NZN9 384 aa18.46■□□□□ 0.55
VPS52-214ENST00000463486 LSM7Q9UK45 103 aaKnown RBP18.46■□□□□ 0.55
VPS52-214ENST00000463486 VPS13AQ96RL7 3174 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 A0A0A0MRY4 1105 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 FAM170AA1A519 330 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 ANTXRLA6NF34 631 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 LRRC53A6NM62 1247 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 NCAM2O15394 837 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 ADH1CP00326 375 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 EGFP01133 1207 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 ADH5P11766 374 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 MMP8P22894 467 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 MAGEA9P43362 315 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 AMPD2Q01433 879 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 EFHC1Q5JVL4 640 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 DGKKQ5KSL6 1271 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 OR6B2Q6IFH4 312 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 Q6ZS52 159 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 ERICH1Q86X53 443 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 ZDHHC17Q8IUH5 632 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 DENND1CQ8IV53 801 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 ADAM32Q8TC27 787 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 GOLGA1Q92805 767 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 CD101Q93033 1021 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 FAM149B1Q96BN6 582 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 C18orf8Q96DM3 657 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 FCRL2Q96LA5 508 aaPredicted RBP18.45■□□□□ 0.54
VPS52-214ENST00000463486 AGPAT1Q99943 283 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 ADAM33Q9BZ11 813 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 XPO4Q9C0E2 1151 aaKnown RBP18.45■□□□□ 0.54
VPS52-214ENST00000463486 PDCL3Q9H2J4 239 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 ZNF510Q9Y2H8 683 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 CEP83Q9Y592 693 aa18.45■□□□□ 0.54
VPS52-214ENST00000463486 HSF2BPO75031 334 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 FERP16591 822 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 GAD2Q05329 585 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 RING1Q06587 406 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 MTAPQ13126 283 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 NNTQ13423 1086 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 CLEC16AQ2KHT3 1053 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 OTUD1Q5VV17 481 aaPredicted RBP18.44■□□□□ 0.54
VPS52-214ENST00000463486 FYB2Q5VWT5 728 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 TAC4Q86UU9 113 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 SFTPA1Q8IWL2 248 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 DEFB106AQ8N104 65 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms