RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TTC13Q8NBP0 860 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 VN1R2Q8NFZ6 395 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 C18orf25Q96B23 403 aaPredicted RBP10.33□□□□□ -0.76
PTPRD-207ENST00000463477 KIF12Q96FN5 646 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 CCDC77Q9BR77 488 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 TTPALQ9BTX7 342 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 HEMGNQ9BXL5 484 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 NINJ2Q9NZG7 142 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 SIX4Q9UIU6 781 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 USTQ9Y2C2 406 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 C2CD2Q9Y426 696 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 HCFC2Q9Y5Z7 792 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 CUL9Q8IWT3 2517 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 ATG2AQ2TAZ0 1938 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 F8VP50 259 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 SMAPO00193 183 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 CDH16O75309 829 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 CILPO75339 1184 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 SRGAP2BP0DMP2 458 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 IGFBP6P24592 240 aaPredicted RBP10.32□□□□□ -0.76
PTPRD-207ENST00000463477 CA8P35219 290 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 KCNQ1P51787 676 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 RAD23BP54727 409 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 IFI35P80217 286 aaPredicted RBP10.32□□□□□ -0.76
PTPRD-207ENST00000463477 INCA1Q0VD86 236 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 MORF4L2Q15014 288 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 RASA2Q15283 850 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 HADHQ16836 314 aaKnown RBP10.32□□□□□ -0.76
PTPRD-207ENST00000463477 KCTD19Q17RG1 926 aaPredicted RBP10.32□□□□□ -0.76
PTPRD-207ENST00000463477 PTPN20Q4JDL3 420 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 DAB2IPQ5VWQ8 1189 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 MFSD7Q6UXD7 560 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 EXOC3L1Q86VI1 746 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 TDRPQ86YL5 185 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 CACNA2D3Q8IZS8 1091 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 C1orf127Q8N9H9 656 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 SMRP1Q8NCR6 262 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 SLC35B2Q8TB61 432 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 HASPINQ8TF76 798 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 SLC22A17Q8WUG5 538 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 CASP10Q92851 521 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 MCRS1Q96EZ8 462 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 SEC16BQ96JE7 1060 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 DDX23Q9BUQ8 820 aaKnown RBP10.32□□□□□ -0.76
PTPRD-207ENST00000463477 MIS12Q9H081 205 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 RABEP2Q9H5N1 569 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 ACTR5Q9H9F9 607 aaPredicted RBP10.32□□□□□ -0.76
PTPRD-207ENST00000463477 PCDH9Q9HC56 1237 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 INTS9Q9NV88 658 aaKnown RBP10.32□□□□□ -0.76
PTPRD-207ENST00000463477 EURLQ9NYK6 297 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 CD207Q9UJ71 328 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 KIAA1257Q9ULG3 409 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 SHOC2Q9UQ13 582 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 FAM50BQ9Y247 325 aa10.32□□□□□ -0.76
PTPRD-207ENST00000463477 C3orf70A6NLC5 250 aaPredicted RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 C2CD2LO14523 706 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 TEX28O15482 410 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 GJB6O95452 261 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 ADH1AP07327 375 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 VDRP11473 427 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 KRT3P12035 628 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 FGFR3P22607 806 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 PAX3P23760 479 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SSR1P43307 286 aaKnown RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CLCN4P51793 760 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SLC25A11Q02978 314 aaKnown RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CREMQ03060 361 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 NR1H3Q13133 447 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 ITIH4Q14624 930 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CNGA2Q16280 664 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 LACTB2Q53H82 288 aaPredicted RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 RTP2Q5QGT7 225 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 UBAP2Q5T6F2 1119 aaKnown RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 JADE1Q6IE81 842 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 PTCRAQ6ISU1 281 aaPredicted RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 ANKRD54Q6NXT1 300 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 DENND1BQ6P3S1 775 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 BBS12Q6ZW61 710 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 PIGWQ7Z7B1 504 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CPLX4Q7Z7G2 160 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 PCGF5Q86SE9 256 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SLC4A11Q8NBS3 891 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 BEST2Q8NFU1 509 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 MDM1Q8TC05 714 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CFAP57Q96MR6 1250 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SELENOSQ9BQE4 189 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 S1PR5Q9H228 398 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 TUBGCP4Q9UGJ1 667 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 ITGA11Q9UKX5 1188 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 DNPEPQ9ULA0 475 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 TPX2Q9ULW0 747 aaKnown RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 BARX2Q9UMQ3 279 aaPredicted RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SCN1AP35498 2009 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SYN3O14994 580 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 MBTPS2O43462 519 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 ACSL3O95573 720 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 NFICP08651 508 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SSTR3P32745 418 aaPredicted RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 RFC1P35251 1148 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms