RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 HIPK3Q9H422 1215 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 MRPS23Q9Y3D9 190 aaKnown RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 CAPN6Q9Y6Q1 641 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 TRIM49D1C9J1S8 452 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 DYRK3O43781 588 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 PAEPP09466 180 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 RBM43Q6ZSC3 357 aaKnown RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 E2F7Q96AV8 911 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 SHCBP1LQ9BZQ2 653 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 WARS2Q9UGM6 360 aaKnown RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 CDV3Q9UKY7 258 aaKnown RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 USP2O75604 605 aaPredicted RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 SERPINF2P08697 491 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 CYP2A6P11509 494 aaPredicted RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 MAGEA9P43362 315 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 USP41Q3LFD5 358 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 PRUNE1Q86TP1 453 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 MCOLN2Q8IZK6 566 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 ABCC13Q9NSE7 274 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 USP15Q9Y4E8 981 aaPredicted RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 A0A087X0B3 334 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 SPATA31C2B4DYI2 1134 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 PSMD10O75832 226 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 ATP5BP06576 529 aaKnown RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 C16orf89Q6UX73 402 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 DNAAF5Q86Y56 855 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 ARMC2Q8NEN0 867 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 OR9Q1Q8NGQ5 310 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 EXD1Q8NHP7 514 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 AHCYL2Q96HN2 611 aaKnown RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 PNMA8BQ9ULN7 279 aaPredicted RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 KRT16P08779 473 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 ATP5C1P36542 298 aaKnown RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 HSD17B3P37058 310 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 ANO5Q75V66 913 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 CCNJLQ8IV13 435 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 IL1RL2Q9HB29 575 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 CENPAP49450 140 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 SERPINB8P50452 374 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 SLC6A3Q01959 620 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 CDC16Q13042 620 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 DOK6Q6PKX4 331 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 CEP41Q9BYV8 373 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
NUP58-206ENST00000463407 EIF3LQ9Y262 564 aaKnown RBP13.19□□□□□ -0.3
NUP58-206ENST00000463407 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
NUP58-206ENST00000463407 ZW10O43264 779 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 SUPT7LO94864 414 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 ITGB6P18564 788 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 ITGA7Q13683 1181 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
NUP58-206ENST00000463407 ANKS6Q68DC2 871 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 LONP2Q86WA8 852 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 POPDC2Q9HBU9 364 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 C3P01024 1663 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 MEIS2O14770 477 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 ADH1AP07327 375 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 POLE2P56282 527 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 FAM110CQ1W6H9 321 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 IFNEQ86WN2 208 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 PARP9Q8IXQ6 854 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 PCYOX1LQ8NBM8 494 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 OMDQ99983 421 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 ULBP1Q9BZM6 244 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 ZDHHC6Q9H6R6 413 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 WHRNQ9P202 907 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 TNFSF13BQ9Y275 285 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 MLNP12872 115 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 SERPINB4P48594 390 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 ST3GAL1Q11201 340 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
NUP58-206ENST00000463407 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
NUP58-206ENST00000463407 B4GALNT2Q8NHY0 566 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 SERPINB12Q96P63 405 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 MARCH2Q9P0N8 246 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 ARHGAP20Q9P2F6 1191 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 MTO1Q9Y2Z2 717 aaKnown RBP13.18□□□□□ -0.3
NUP58-206ENST00000463407 TISP43B9A030 160 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 SLC9A3R1O14745 358 aaPredicted RBP13.18□□□□□ -0.3
NUP58-206ENST00000463407 CXCL14O95715 111 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 HSPA1AP0DMV8 641 aaKnown RBP13.18□□□□□ -0.3
NUP58-206ENST00000463407 HSPA1BP0DMV9 641 aaKnown RBP13.18□□□□□ -0.3
NUP58-206ENST00000463407 CAPZA2P47755 286 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 BCL2L1Q07817 233 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 GAS2L1Q99501 681 aaPredicted RBP13.18□□□□□ -0.3
NUP58-206ENST00000463407 CACNA2D2Q9NY47 1150 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 VANGL2Q9ULK5 521 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 TDRKHQ9Y2W6 561 aaKnown RBP13.18□□□□□ -0.3
NUP58-206ENST00000463407 PDZK1P1A8MUH7 402 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 A8MX80 341 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 SMIM22K7EJ46 135 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 KLHL2O95198 593 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 APOA4P06727 396 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 CACHD1Q5VU97 1274 aa13.18□□□□□ -0.3
NUP58-206ENST00000463407 ZNF556Q9HAH1 456 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms