RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 C10orf120Q5SQS8 335 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 CEP135Q66GS9 1140 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 RGL4Q8IZJ4 473 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 JAKMIP2Q96AA8 810 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 DNAI2Q9GZS0 605 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 CACNA2D2Q9NY47 1150 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 RAD54BQ9Y620 910 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 ADAMTS9Q9P2N4 1935 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 ZZEF1O43149 2961 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 FAM208BQ5VWN6 2430 aa20.82■□□□□ 0.92
VARS-221ENST00000463184 PCDH15Q96QU1 1955 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 CACNA1EQ15878 2313 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 SRRM3A6NNA2 597 aaPredicted RBP20.81■□□□□ 0.92
VARS-221ENST00000463184 NPC1O15118 1278 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 MDM4O15151 490 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 ACTN4O43707 911 aaKnown RBP20.81■□□□□ 0.92
VARS-221ENST00000463184 CALUO43852 315 aaPredicted RBP20.81■□□□□ 0.92
VARS-221ENST00000463184 RALAP11233 206 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 CD59P13987 128 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 GNSP15586 552 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 VAMP7P51809 220 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 ZNF423Q2M1K9 1284 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 WDR45BQ5MNZ6 344 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 C1orf220Q5T0J3 134 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 METTL3Q86U44 580 aaKnown RBP20.81■□□□□ 0.92
VARS-221ENST00000463184 ZCCHC14Q8WYQ9 949 aaKnown RBP20.81■□□□□ 0.92
VARS-221ENST00000463184 ERLEC1Q96DZ1 483 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 TWNKQ96RR1 684 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 CDK5RAP1Q96SZ6 601 aaKnown RBP20.81■□□□□ 0.92
VARS-221ENST00000463184 PLK2Q9NYY3 685 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 NAGPAQ9UK23 515 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 NUDT5Q9UKK9 219 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 KLK13Q9UKR3 277 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 SLC27A6Q9Y2P4 619 aa20.81■□□□□ 0.92
VARS-221ENST00000463184 FAM221BA6H8Z2 402 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 WASH3PC4AMC7 463 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 STC2O76061 302 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 KIF20AO95235 890 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 MYL1P05976 194 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 CHKAP35790 457 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 ZNF132P52740 706 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 STARD3Q14849 445 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 PLEKHG6Q3KR16 790 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 CCDC186Q7Z3E2 898 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 BHMTQ93088 406 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 SLC6A17Q9H1V8 727 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 CLIC5Q9NZA1 410 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 TRAF3IP3Q9Y228 551 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 USP3Q9Y6I4 520 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 STON1Q9Y6Q2 735 aa20.8■□□□□ 0.92
VARS-221ENST00000463184 CILPO75339 1184 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 CD6P30203 668 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 FAM193AP78312 1265 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 COG7P83436 770 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 KIAA1324Q6UXG2 1013 aaKnown RBP20.79■□□□□ 0.92
VARS-221ENST00000463184 SCD5Q86SK9 330 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 OR2I1PQ8NGU4 316 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 DUSP16Q9BY84 665 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 DCLK3Q9C098 648 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 APOBEC3GQ9HC16 384 aaKnown RBP20.79■□□□□ 0.92
VARS-221ENST00000463184 CD93Q9NPY3 652 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 USP25Q9UHP3 1055 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 NFE2L3Q9Y4A8 694 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 IGF2RP11717 2491 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 SPEGQ15772 3267 aa20.79■□□□□ 0.92
VARS-221ENST00000463184 GJB3O75712 270 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 PENKP01210 267 aaPredicted RBP20.78■□□□□ 0.92
VARS-221ENST00000463184 KLKB1P03952 638 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 ENPEPQ07075 957 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 E2F5Q15329 346 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 NFIL3Q16649 462 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 FYB2Q5VWT5 728 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 INTS8Q75QN2 995 aaKnown RBP20.78■□□□□ 0.92
VARS-221ENST00000463184 CCDC150Q8NCX0 1101 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 UCMAQ8WVF2 138 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 ZDHHC5Q9C0B5 715 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 NIF3L1Q9GZT8 377 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 PRDM16Q9HAZ2 1276 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 WSB2Q9NYS7 404 aaPredicted RBP20.78■□□□□ 0.92
VARS-221ENST00000463184 THAP10Q9P2Z0 257 aaPredicted RBP20.78■□□□□ 0.92
VARS-221ENST00000463184 PCDHB9Q9Y5E1 797 aa20.78■□□□□ 0.92
VARS-221ENST00000463184 WDFY3Q8IZQ1 3526 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 CACNA1GO43497 2377 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 CD58P19256 250 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 GCLMP48507 274 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 MFAP3P55082 362 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 ENPP2Q13822 863 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 TRIP6Q15654 476 aaKnown RBP20.77■□□□□ 0.92
VARS-221ENST00000463184 FUT11Q495W5 492 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 PPP1R26Q5T8A7 1209 aaPredicted RBP20.77■□□□□ 0.92
VARS-221ENST00000463184 RAB44Q7Z6P3 723 aaPredicted RBP20.77■□□□□ 0.92
VARS-221ENST00000463184 CHCHD4Q8N4Q1 142 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 TAS1R2Q8TE23 839 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 DNASE2BQ8WZ79 361 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 ITM2CQ9NQX7 267 aa20.77■□□□□ 0.92
VARS-221ENST00000463184 USP36Q9P275 1121 aaKnown RBP20.77■□□□□ 0.92
VARS-221ENST00000463184 AKAP13Q12802 2813 aa20.76■□□□□ 0.91
VARS-221ENST00000463184 SH3BP5O60239 455 aa20.76■□□□□ 0.91
VARS-221ENST00000463184 KRT13P13646 458 aa20.76■□□□□ 0.91
VARS-221ENST00000463184 CMA1P23946 247 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms