RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 HHLA1C9JL84 531 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 HOXA2O43364 376 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 RBP3P10745 1247 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 TGM2P21980 687 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 NOS2P35228 1153 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 GTF2A1P52655 376 aaPredicted RBP15.05■□□□□ -0
HDAC6-213ENST00000462730 BCAR1P56945 870 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 PITX1P78337 314 aaPredicted RBP15.05■□□□□ -0
HDAC6-213ENST00000462730 DPYSL2Q16555 572 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 AGBL2Q5U5Z8 902 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 KDM7AQ6ZMT4 941 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 HOOK3Q86VS8 718 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 FAM131BQ86XD5 332 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 MICALL1Q8N3F8 863 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 ZCCHC9Q8N567 271 aaKnown RBP15.05■□□□□ -0
HDAC6-213ENST00000462730 PLD5Q8N7P1 536 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 FAF2Q96CS3 445 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 PKMYT1Q99640 499 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 STAP1Q9ULZ2 295 aa15.05■□□□□ -0
HDAC6-213ENST00000462730 VWA8A3KMH1 1905 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 SYNJ2BP-COX16A0A087WUM0 186 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 TBKBP1A7MCY6 615 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 ZNF487B1APH4 448 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 H7C0C1 242 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 USP17L7P0C7H9 530 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 BDNFP23560 247 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 CYP2F1P24903 491 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 ATP5OP48047 213 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 TSPY1Q01534 308 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 RAB41Q5JT25 222 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 SLC9A4Q6AI14 798 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 DARS2Q6PI48 645 aaKnown RBP15.04■□□□□ -0
HDAC6-213ENST00000462730 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.04■□□□□ -0
HDAC6-213ENST00000462730 B4GALNT4Q76KP1 1039 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 ZC3H18Q86VM9 953 aaKnown RBP15.04■□□□□ -0
HDAC6-213ENST00000462730 SPATS2Q86XZ4 545 aaKnown RBP15.04■□□□□ -0
HDAC6-213ENST00000462730 FAM71DQ8N9W8 422 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 NPY6RQ99463 290 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 MRPL9Q9BYD2 267 aaKnown RBP15.04■□□□□ -0
HDAC6-213ENST00000462730 MAGEB5Q9BZ81 275 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 FOXP3Q9BZS1 431 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 POPDC2Q9HBU9 364 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 CNGB3Q9NQW8 809 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 COX16Q9P0S2 106 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 PTPRDP23468 1912 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 LTBP2Q14767 1821 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 YJEFN3A6XGL0 299 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 E7ENQ6 273 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 NDUFAB1O14561 156 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 NDC80O14777 642 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 TADA2AO75478 443 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 ACSL3O95573 720 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 NR1D1P20393 614 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 RDXP35241 583 aaKnown RBP15.04■□□□□ -0
HDAC6-213ENST00000462730 ATP1A2P50993 1020 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 MORF4L2Q15014 288 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 RNASEH2BQ5TBB1 312 aaKnown RBP15.04■□□□□ -0
HDAC6-213ENST00000462730 SYPL2Q5VXT5 272 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 CNKSR3Q6P9H4 555 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 VWCEQ96DN2 955 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 CSNK1G1Q9HCP0 422 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 MARCH5Q9NX47 278 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 MTMR10Q9NXD2 777 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 NINJ2Q9NZG7 142 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 ADAM28Q9UKQ2 775 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 FZD10Q9ULW2 581 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 NAALADL1Q9UQQ1 740 aa15.04■□□□□ -0
HDAC6-213ENST00000462730 KIAA0100Q14667 2235 aaKnown RBP15.03■□□□□ -0
HDAC6-213ENST00000462730 SMIM23A6NLE4 172 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 M0QYT0 321 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 CAPN9O14815 690 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 TRAPPC3O43617 180 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 ZBED1O96006 694 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 HSPA1AP0DMV8 641 aaKnown RBP15.03■□□□□ -0
HDAC6-213ENST00000462730 HSPA1BP0DMV9 641 aaKnown RBP15.03■□□□□ -0
HDAC6-213ENST00000462730 RPL22P35268 128 aaKnown RBP15.03■□□□□ -0
HDAC6-213ENST00000462730 LIG3P49916 1009 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 DEUP1Q05D60 604 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 SWT1Q5T5J6 900 aaKnown RBP15.03■□□□□ -0
HDAC6-213ENST00000462730 EMC10Q5UCC4 262 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 CEP128Q6ZU80 1094 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 LRRTM3Q86VH5 581 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 LRRC43Q8N309 656 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 NT5C3BQ969T7 300 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 DMAP1Q9NPF5 467 aaPredicted RBP15.03■□□□□ -0
HDAC6-213ENST00000462730 PRDM5Q9NQX1 630 aaPredicted RBP15.03■□□□□ -0
HDAC6-213ENST00000462730 SHOC2Q9UQ13 582 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 HEY1Q9Y5J3 304 aa15.03■□□□□ -0
HDAC6-213ENST00000462730 UPP2O95045 317 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 LTFP02788 710 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 FYNP06241 537 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 ITGB8P26012 769 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 PBX3P40426 434 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 SLC11A1P49279 550 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 CTCFP49711 727 aaPredicted RBP15.02■□□□□ -0
HDAC6-213ENST00000462730 PSEN1P49768 467 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 NME3Q13232 169 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 IKBKEQ14164 716 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 MAPRE1Q15691 268 aaKnown RBP15.02■□□□□ -0
HDAC6-213ENST00000462730 BNIPLQ7Z465 357 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms