RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ABHD16BQ9H3Z7 469 aa5.62□□□□□ -1.51
COPS3-204ENST00000462236 UBE2ZQ9H832 354 aaPredicted RBP5.62□□□□□ -1.51
COPS3-204ENST00000462236 FBXO28Q9NVF7 368 aa5.62□□□□□ -1.51
COPS3-204ENST00000462236 RLIMQ9NVW2 624 aa5.62□□□□□ -1.51
COPS3-204ENST00000462236 FEZ2Q9UHY8 353 aaPredicted RBP5.62□□□□□ -1.51
COPS3-204ENST00000462236 L1RE1Q9UN81 338 aa5.62□□□□□ -1.51
COPS3-204ENST00000462236 RIPK3Q9Y572 518 aa5.62□□□□□ -1.51
COPS3-204ENST00000462236 PNMA6EA0A0J9YXQ4 647 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.61□□□□□ -1.51
COPS3-204ENST00000462236 CAPN8A6NHC0 703 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 NT5C1B-RDH14C9J2C7 533 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 FRS3O43559 492 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 STC2O76061 302 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 POMCP01189 267 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 MYL1P05976 194 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 TRIM27P14373 513 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 IL9P15248 144 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 FPR1P21462 350 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 BEX3Q00994 111 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 ITGA7Q13683 1181 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 FGL2Q14314 439 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 FAM214AQ32MH5 1076 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 CCDC157Q569K6 752 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 EMC10Q5UCC4 262 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 EFCAB12Q6NXP0 572 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 GPR179Q6PRD1 2367 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 CXCL17Q6UXB2 119 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 ARMCX2Q7L311 632 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 GSPT2Q8IYD1 628 aaKnown RBP5.61□□□□□ -1.51
COPS3-204ENST00000462236 Q8TCH9 128 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 NEK9Q8TD19 979 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 STON2Q8WXE9 905 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 VRK1Q99986 396 aaPredicted RBP5.61□□□□□ -1.51
COPS3-204ENST00000462236 SARGQ9BW04 601 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 DOCK5Q9H7D0 1870 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 CERS4Q9HA82 394 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 PNPOQ9NVS9 261 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 AURKAIP1Q9NWT8 199 aaPredicted RBP5.61□□□□□ -1.51
COPS3-204ENST00000462236 SLC23A1Q9UHI7 598 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 ZDHHC8Q9ULC8 765 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 FPGT-TNNI3KV9GXZ4 949 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 USP24Q9UPU5 2620 aa5.61□□□□□ -1.51
COPS3-204ENST00000462236 PLXNA4Q9HCM2 1894 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 GOLGA6L6A8MZA4 724 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 DCXO43602 365 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 SLC43A1O75387 559 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 AKR1B1P15121 316 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 RHCEP18577 417 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 RHDQ02161 417 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 ICA1Q05084 483 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 GPNMBQ14956 572 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 FLYWCH1Q4VC44 716 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 ATXN7L2Q5T6C5 722 aaPredicted RBP5.6□□□□□ -1.51
COPS3-204ENST00000462236 GORABQ5T7V8 394 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 NPNTQ6UXI9 565 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 Q6ZSN1 163 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 HERC6Q8IVU3 1022 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 SPICE1Q8N0Z3 855 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 AOPEPQ8N6M6 819 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 DCBLD1Q8N8Z6 715 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 FAM133AQ8N9E0 248 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 MIGA1Q8NAN2 632 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 PRSS33Q8NF86 280 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 PPP1R35Q8TAP8 253 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 SLC35B2Q8TB61 432 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 ARNTL2Q8WYA1 636 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 TFAP2CQ92754 450 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 NDC1Q9BTX1 674 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 TEX13BQ9BXU2 312 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 TRPV6Q9H1D0 765 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 ALDH8A1Q9H2A2 487 aaPredicted RBP5.6□□□□□ -1.51
COPS3-204ENST00000462236 ARNT2Q9HBZ2 717 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 CD248Q9HCU0 757 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 JKAMPQ9P055 326 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 SWAP70Q9UH65 585 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 DBNLQ9UJU6 430 aaKnown RBP5.6□□□□□ -1.51
COPS3-204ENST00000462236 ZHX1Q9UKY1 873 aaPredicted RBP5.6□□□□□ -1.51
COPS3-204ENST00000462236 Q9Y3F1 56 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 PCDHA3Q9Y5H8 950 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 PKD1L2Q7Z442 2459 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 CFAP47Q6ZTR5 3102 aa5.6□□□□□ -1.51
COPS3-204ENST00000462236 BAZ2BQ9UIF8 2168 aaKnown RBP5.59□□□□□ -1.51
COPS3-204ENST00000462236 ZBED9Q6R2W3 1325 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 CAPN14A8MX76 684 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 DIRC3C9JPN6 131 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 H3BUI4 141 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 K7ESM1 405 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 F2RL2O00254 374 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 GOLIM4O00461 696 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 TPP1O14773 563 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 BAIAP3O94812 1187 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 GNAI3P08754 354 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 RPL17P18621 184 aaKnown RBP5.59□□□□□ -1.51
COPS3-204ENST00000462236 RFC2P35250 354 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 RAB1AP62820 205 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 SLFN5Q08AF3 891 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 TCF15Q12870 199 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 UBXN2BQ14CS0 331 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 CCDC158Q5M9N0 1113 aa5.59□□□□□ -1.51
COPS3-204ENST00000462236 TTC39AQ5SRH9 613 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms