RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 PIK3R2O00459 728 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 STC2O76061 302 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 CHKAP35790 457 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 EIF2DP41214 584 aaKnown RBP15.63■□□□□ 0.09
ATG4B-213ENST00000460211 ZNF165P49910 485 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 NRLP54845 237 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 ARHGAP8P85298 464 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 ANO4Q32M45 955 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 FSTL4Q6MZW2 842 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 FAM71AQ8IYT1 594 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 EDEM1Q92611 657 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 CHFRQ96EP1 664 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 FAM126AQ9BYI3 521 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-213ENST00000460211 LHX5Q9H2C1 402 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 ACP6Q9NPH0 428 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 SPHK2Q9NRA0 654 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 WDR35Q9P2L0 1181 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 PCDHGC3Q9UN70 934 aa15.63■□□□□ 0.09
ATG4B-213ENST00000460211 HBS1LQ9Y450 684 aaKnown RBP15.63■□□□□ 0.09
ATG4B-213ENST00000460211 KMT2BQ9UMN6 2715 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-213ENST00000460211 TPRP12270 2363 aaKnown RBP15.62■□□□□ 0.09
ATG4B-213ENST00000460211 LGALS16A8MUM7 142 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 EGFP01133 1207 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 LTFP02788 710 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 HMBSP08397 361 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 ZNF18P17022 549 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 TGM1P22735 817 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 CLCN1P35523 988 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 RPL34P49207 117 aaKnown RBP15.62■□□□□ 0.09
ATG4B-213ENST00000460211 HARS2P49590 506 aaKnown RBP15.62■□□□□ 0.09
ATG4B-213ENST00000460211 TPM4P67936 248 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 UBXN1Q04323 297 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 SPEM2Q0P670 501 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 NCAPHQ15003 741 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 BHLHA9Q7RTU4 235 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 TMEM110Q86TL2 294 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 SCUBE3Q8IX30 993 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 FAM149B1Q96BN6 582 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 PLD4Q96BZ4 506 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 PNKPQ96T60 521 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 SLC4A5Q9BY07 1137 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 FAM207AQ9NSI2 230 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-213ENST00000460211 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.62■□□□□ 0.09
ATG4B-213ENST00000460211 COL4A2P08572 1712 aa15.62■□□□□ 0.09
ATG4B-213ENST00000460211 CAPN9O14815 690 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 HOXC11O43248 304 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-213ENST00000460211 GREM1O60565 184 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 GABBR2O75899 941 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 APODP05090 189 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 NCAM1P13591 858 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 CORO1AP31146 461 aaKnown RBP15.61■□□□□ 0.09
ATG4B-213ENST00000460211 OPRD1P41143 372 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 FILIP1LQ4L180 1135 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 DPY19L2P1Q6NXN4 242 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 PRR23BQ6ZRT6 265 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 Q6ZS52 159 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 SLC47A2Q86VL8 602 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 TMEM25Q86YD3 366 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 FMNL3Q8IVF7 1028 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 NEK11Q8NG66 645 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 WBP2Q969T9 261 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 XPO6Q96QU8 1125 aaKnown RBP15.61■□□□□ 0.09
ATG4B-213ENST00000460211 SPAG5Q96R06 1193 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 RTKNQ9BST9 563 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 BBS2Q9BXC9 721 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 NAA15Q9BXJ9 866 aaKnown RBP15.61■□□□□ 0.09
ATG4B-213ENST00000460211 SYNCQ9H7C4 482 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 FBRSL1Q9HCM7 1045 aaKnown RBP15.61■□□□□ 0.09
ATG4B-213ENST00000460211 DEC1Q9P2X7 70 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 AJAP1Q9UKB5 411 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-213ENST00000460211 RAB23Q9ULC3 237 aa15.61■□□□□ 0.09
ATG4B-213ENST00000460211 KIF26AQ9ULI4 1882 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-213ENST00000460211 HELZP42694 1942 aaKnown RBP15.6■□□□□ 0.09
ATG4B-213ENST00000460211 SYCE3A1L190 88 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 RNF40O75150 1001 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 CAVIN2O95810 425 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 CYBBP04839 570 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 PNMA6AP0CW24 399 aaPredicted RBP15.6■□□□□ 0.09
ATG4B-213ENST00000460211 CYP11B1P15538 503 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 GRIA2P42262 883 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 POLR2FP61218 127 aaKnown RBP15.6■□□□□ 0.09
ATG4B-213ENST00000460211 PDCLQ13371 301 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 SYCP1Q15431 976 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 TRIP4Q15650 581 aaPredicted RBP15.6■□□□□ 0.09
ATG4B-213ENST00000460211 MSANTD2Q6P1R3 559 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 Q6ZNB5 142 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 TPGS1Q6ZTW0 290 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 BEND5Q7L4P6 421 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 PASD1Q8IV76 773 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 TMEM35BQ8NCS4 154 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 IPO4Q8TEX9 1081 aaKnown RBP15.6■□□□□ 0.09
ATG4B-213ENST00000460211 PPP1R13BQ96KQ4 1090 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 ARHGEF4Q9NR80 690 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 SFMBT1Q9UHJ3 866 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 MYO16Q9Y6X6 1858 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 ACACBO00763 2458 aa15.6■□□□□ 0.09
ATG4B-213ENST00000460211 CHURC1-FNTBB4DL54 471 aa15.59■□□□□ 0.09
ATG4B-213ENST00000460211 E5RJQ4 531 aa15.59■□□□□ 0.09
ATG4B-213ENST00000460211 NEDD8-MDP1E9PL57 170 aa15.59■□□□□ 0.09
ATG4B-213ENST00000460211 F8VZ95 297 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms