RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 IRF7Q92985 503 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 PLD4Q96BZ4 506 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 CHFRQ96EP1 664 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 FAM83CQ9BQN1 747 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 EBF3Q9H4W6 596 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 HEBP1Q9NRV9 189 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 DUS2Q9NX74 493 aaKnown RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 GTSE1Q9NYZ3 720 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 ADAM22Q9P0K1 906 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 CALCOCO1Q9P1Z2 691 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 LSM7Q9UK45 103 aaKnown RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 FBXL21Q9UKT6 434 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 MUC22E2RYF6 1773 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 A0A087X0T9 212 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 TCRBV5S1A1TA0A578 114 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 E2F8A0AVK6 867 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 AKR1B15C9JRZ8 316 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-206ENST00000459895 PI4K2BG5E9Z4 385 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 CAPN9O14815 690 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 PDGFBP01127 241 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-206ENST00000459895 KLKB1P03952 638 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 CYP17A1P05093 508 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 CALB1P05937 261 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 FAM228BP0C875 321 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 ALADP13716 330 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 EIF4A3P38919 411 aaKnown RBP13.38□□□□□ -0.27
COL18A1-206ENST00000459895 SULT1E1P49888 294 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 SNX16P57768 344 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 PFKPQ01813 784 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 PDGFRLQ15198 375 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 TRIP4Q15650 581 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-206ENST00000459895 MLF2Q15773 248 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-206ENST00000459895 DCAF6Q58WW2 860 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 EFHC1Q5JVL4 640 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 ACAD10Q6JQN1 1059 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 DNAJC24Q6P3W2 148 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 MCOLN2Q8IZK6 566 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 SIX5Q8N196 739 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 OR8K1Q8NGG5 319 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 JOSD2Q8TAC2 188 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 ATP2A3Q93084 1043 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 ZNF653Q96CK0 615 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 FCRL2Q96LA5 508 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-206ENST00000459895 SERPINB11Q96P15 392 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 EPHX3Q9H6B9 360 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 C11orf16Q9NQ32 467 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 THG1LQ9NWX6 298 aaKnown RBP13.38□□□□□ -0.27
COL18A1-206ENST00000459895 TMEM59LQ9UK28 342 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 HBS1LQ9Y450 684 aaKnown RBP13.38□□□□□ -0.27
COL18A1-206ENST00000459895 BZW2Q9Y6E2 419 aaKnown RBP13.38□□□□□ -0.27
COL18A1-206ENST00000459895 PIAS3Q9Y6X2 628 aa13.38□□□□□ -0.27
COL18A1-206ENST00000459895 SYNJ2BP-COX16A0A087WUM0 186 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 TMEM221A6NGB7 291 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 SHISA7A6NL88 538 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 M0R296 226 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 TRUB2O95900 331 aaKnown RBP13.37□□□□□ -0.27
COL18A1-206ENST00000459895 RRM1P23921 792 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 MATKP42679 507 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 RNASE9P60153 205 aaKnown RBP13.37□□□□□ -0.27
COL18A1-206ENST00000459895 NNTQ13423 1086 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 NAIF1Q69YI7 327 aaPredicted RBP13.37□□□□□ -0.27
COL18A1-206ENST00000459895 CWF19L1Q69YN2 538 aaKnown RBP13.37□□□□□ -0.27
COL18A1-206ENST00000459895 TRIM67Q6ZTA4 783 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 TPRG1Q6ZUI0 275 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 CPA6Q8N4T0 437 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 CFAP57Q96MR6 1250 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 MCEEQ96PE7 176 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL18A1-206ENST00000459895 TRPV5Q9NQA5 729 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 DDIT4Q9NX09 232 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 COX16Q9P0S2 106 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 ADAMTS1Q9UHI8 967 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 CUL9Q8IWT3 2517 aa13.37□□□□□ -0.27
COL18A1-206ENST00000459895 NYNRINQ9P2P1 1898 aaKnown RBP13.36□□□□□ -0.27
COL18A1-206ENST00000459895 NFATC1O95644 943 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 CTHP32929 405 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 TBX4P57082 545 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 COG7P83436 770 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 GFPT1Q06210 699 aaPredicted RBP13.36□□□□□ -0.27
COL18A1-206ENST00000459895 MAPK8IP2Q13387 824 aaPredicted RBP13.36□□□□□ -0.27
COL18A1-206ENST00000459895 RUNX3Q13761 415 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 GAB4Q2WGN9 574 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 ITPRIPL2Q3MIP1 535 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 PPP1R15BQ5SWA1 713 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 TXNDC11Q6PKC3 985 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 HTR3DQ70Z44 454 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 VPS36Q86VN1 386 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 DENND1CQ8IV53 801 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 KIAA1958Q8N8K9 716 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 CSGALNACT1Q8TDX6 532 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 P2RY11Q96G91 374 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 SLC39A13Q96H72 371 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 TBCBQ99426 244 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 NPY6RQ99463 290 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 CHP1Q99653 195 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 SELENOOQ9BVL4 669 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 LINC00597Q9H2U6 94 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 PIGVQ9NUD9 493 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 SPTLC3Q9NUV7 552 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms