RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 MLKLQ8NB16 471 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 STK32AQ8WU08 396 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 SLC35F5Q8WV83 523 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 AZIN2Q96A70 460 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 SPACA7Q96KW9 195 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 IPO9Q96P70 1041 aaKnown RBP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 TRIM62Q9BVG3 475 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 MARCH2Q9P0N8 246 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 RWDD2AQ9UIY3 292 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 STOML2Q9UJZ1 356 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 TPRP12270 2363 aaKnown RBP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 NEDD8-MDP1E9PL57 170 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 ZBTB24O43167 697 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 TIMM44O43615 452 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 GADD45BO75293 160 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 KLF8O95600 359 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 CYBBP04839 570 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 CISD3P0C7P0 127 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 IRF1P10914 325 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 CD19P15391 556 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 HOXD12P35452 270 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 P2RY2P41231 377 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 DGKGP49619 791 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 ATXN1P54253 815 aaKnown RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 RING1Q06587 406 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 EFEMP1Q12805 493 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 NNTQ13423 1086 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 EIF4HQ15056 248 aaKnown RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 TRIP4Q15650 581 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 LPAL2Q16609 132 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 PMS2CLQ68D20 193 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 KLHL10Q6JEL2 608 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 MSANTD2Q6P1R3 559 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 TMEM270Q6UE05 265 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 RSRC2Q7L4I2 434 aaKnown RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 SIX6OS1Q8N1H7 587 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 PPM1KQ8N3J5 372 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 ALLCQ8N6M5 410 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 ZNF513Q8N8E2 541 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 TXNDC5Q8NBS9 432 aaKnown RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 RNF139Q8WU17 664 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 ERCC4Q92889 916 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 WBP2Q969T9 261 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 GABRG3Q99928 467 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 SRRTQ9BXP5 876 aaKnown RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 ULBP1Q9BZM6 244 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 DNAJC17Q9NVM6 304 aaKnown RBP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.48□□□□□ -0.73
HDLBP-228ENST00000459788 CTNND2Q9UQB3 1225 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 PCDHB4Q9Y5E5 795 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 LAMA1P25391 3075 aa10.48□□□□□ -0.73
HDLBP-228ENST00000459788 BCLAF3A2AJT9 711 aaKnown RBP10.47□□□□□ -0.73
HDLBP-228ENST00000459788 PCNX2A6NKB5 2137 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 SGK1O00141 431 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 MED7O43513 233 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 ADAM23O75077 832 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 ZNF217O75362 1048 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 KLKB1P03952 638 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 C7P10643 843 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 TIE1P35590 1138 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 MPLP40238 635 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 ACADSBP45954 432 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 PXNP49023 591 aaPredicted RBP10.47□□□□□ -0.73
HDLBP-228ENST00000459788 HARS2P49590 506 aaKnown RBP10.47□□□□□ -0.73
HDLBP-228ENST00000459788 SEC13P55735 322 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 DAOAP59103 153 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 KDSRQ06136 332 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 ADIGQ0VDE8 80 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 ENPP2Q13822 863 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 C10orf76Q5T2E6 689 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 MPP7Q5T2T1 576 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 BSPRYQ5W0U4 402 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 ANO7Q6IWH7 933 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 TMEM92Q6UXU6 159 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 SLC36A4Q6YBV0 504 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 CLEC17AQ6ZS10 378 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 BHLHA9Q7RTU4 235 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 RABEPKQ7Z6M1 372 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 METTL3Q86U44 580 aaKnown RBP10.47□□□□□ -0.73
HDLBP-228ENST00000459788 MIB1Q86YT6 1006 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 CCDC33Q8N5R6 958 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 C12orf50Q8NA57 414 aaPredicted RBP10.47□□□□□ -0.73
HDLBP-228ENST00000459788 MDGA1Q8NFP4 955 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 UCMAQ8WVF2 138 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 GOLGA1Q92805 767 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 ARRDC1-AS1Q9H2J1 176 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 TMEM51Q9NW97 253 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 RASAL2Q9UJF2 1139 aa10.47□□□□□ -0.73
HDLBP-228ENST00000459788 ASCC3Q8N3C0 2202 aaKnown RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 ACACBO00763 2458 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 SCAMP3O14828 347 aaKnown RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 IRAK2O43187 625 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 HOXB2P14652 356 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 CORO1AP31146 461 aaKnown RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 MFAP3P55082 362 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 MESP2Q0VG99 397 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 LRMPQ12912 555 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 MPPE1Q53F39 396 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 ADGRF1Q5T601 910 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms