RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 PEX6Q13608 980 aa11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 TP53BP2Q13625 1128 aa11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 HIC1Q14526 733 aa11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 SEZ6Q53EL9 994 aa11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 ZNF571Q7Z3V5 609 aaPredicted RBP11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 SEC16BQ96JE7 1060 aa11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 OXCT2Q9BYC2 517 aaPredicted RBP11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 CD274Q9NZQ7 290 aa11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 DCTN4Q9UJW0 460 aa11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 MRPS23Q9Y3D9 190 aaKnown RBP11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 SNCAIPQ9Y6H5 919 aa11.05□□□□□ -0.64
AMBRA1-202ENST00000458649 IGF2BP3O00425 579 aaKnown RBP eCLIP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 RHOBTB1O94844 696 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 VCPP55072 806 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 BTNL9Q6UXG8 535 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 TRPM8Q7Z2W7 1104 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 TAS1R2Q8TE23 839 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 ERP44Q9BS26 406 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 PRDM16Q9HAZ2 1276 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 RAD18Q9NS91 495 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 CISHQ9NSE2 258 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 TRMT6Q9UJA5 497 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 USP15Q9Y4E8 981 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 RPTORQ8N122 1335 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 C16orf96A6NNT2 1141 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 IFRD1O00458 451 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 E2F6O75461 281 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 SOAT2O75908 522 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 IGSF6O95976 241 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 FAM107AO95990 144 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 PAEPP09466 180 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 CYP11B1P15538 503 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 AARSP49588 968 aaKnown RBP eCLIP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 POLR2LP62875 67 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 SKP1P63208 163 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 CCDC85BQ15834 202 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 METTL3Q86U44 580 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 PHACTR4Q8IZ21 702 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 SLC35C1Q96A29 364 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 TBCBQ99426 244 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 CCT7Q99832 543 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 PACSIN1Q9BY11 444 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 WDR41Q9HAD4 459 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 C20orf96Q9NUD7 363 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 CHORDC1Q9UHD1 332 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 GIT1Q9Y2X7 761 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 FGBP02675 491 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 FGFR4P22455 802 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 HPCAP84074 193 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 IL17AQ16552 155 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 DUSP28Q4G0W2 176 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 LRIG3Q6UXM1 1119 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 SV2AQ7L0J3 742 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 PATL1Q86TB9 770 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 PRUNE1Q86TP1 453 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 BHMTQ93088 406 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 ISCUQ9H1K1 167 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 NEUROG2Q9H2A3 272 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 MAN1C1Q9NR34 630 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 TMA7Q9Y2S6 64 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 MOXD2PA6NHM9 499 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 CCT8L1PA6NM43 557 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 GOLGA8TH3BQL2 631 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 KLRC4O43908 158 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 CCDC157Q569K6 752 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 TATDN1Q6P1N9 297 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 UNC93AQ86WB7 457 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 FAM9CQ8IZT9 166 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 TNFRSF25Q93038 417 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 RIC8BQ9NVN3 520 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 XPO7Q9UIA9 1087 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 CHD2O14647 1828 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 NDUFS2O75306 463 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 VPS26AO75436 327 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 PTPN3P26045 913 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 MAP3K10Q02779 954 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 TBL3Q12788 808 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 ADRM1Q16186 407 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 POP1Q99575 1024 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 PORCNQ9H237 461 aa11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 COPS7BQ9H9Q2 264 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 TSR3Q9UJK0 312 aaKnown RBP11.04□□□□□ -0.64
AMBRA1-202ENST00000458649 M0R3G1 203 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 CLASP2O75122 1294 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 SLURP2P0DP57 97 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 ERVK-10P10266 1014 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 SELPP16109 830 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 POLR2EP19388 210 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 CCL23P55773 120 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 CAMK2GQ13555 558 aaPredicted RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 KRR1Q13601 381 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 ABRAQ8N0Z2 381 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 CD99L2Q8TCZ2 262 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 ZSWIM1Q9BR11 485 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 BTBD7Q9P203 1132 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 RBAK-RBAKDNI3L0D1 243 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms