RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 AP1M1Q9BXS5 423 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 PARD6BQ9BYG5 372 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 OSBPL8Q9BZF1 889 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 ANKZF1Q9H8Y5 726 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 PRDM16Q9HAZ2 1276 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 RC3H2Q9HBD1 1191 aaKnown RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 POPDC2Q9HBU9 364 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 ARFGAP3Q9NP61 516 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 NGRNQ9NPE2 291 aaKnown RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 SMARCAL1Q9NZC9 954 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 USP18Q9UMW8 372 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 UTP11Q9Y3A2 253 aaKnown RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 TMEM221A6NGB7 291 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 ZNF487B1APH4 448 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 LOC730098B7Z3J9 87 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 M0R296 226 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 PIK3R2O00459 728 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 CAPN9O14815 690 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 MDM4O15151 490 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 B4GALT3O60512 393 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 TBX10O75333 385 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 GRAP2O75791 330 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 HEXIM1O94992 359 aaKnown RBP9.32□□□□□ -0.92
VPS50-207ENST00000458530 TRUB2O95900 331 aaKnown RBP9.32□□□□□ -0.92
VPS50-207ENST00000458530 GAS8O95995 478 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 ZBED1O96006 694 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 F9P00740 461 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 CPB1P15086 417 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 H2AFXP16104 143 aaPredicted RBP9.32□□□□□ -0.92
VPS50-207ENST00000458530 BDNFP23560 247 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 MIPP30301 263 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 RDXP35241 583 aaKnown RBP9.32□□□□□ -0.92
VPS50-207ENST00000458530 FLT3P36888 993 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 GRIK1P39086 918 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 DAOAP59103 153 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 CUL1Q13616 776 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 TFDP2Q14188 446 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 KRT81Q14533 505 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 NAA30Q147X3 362 aaPredicted RBP9.32□□□□□ -0.92
VPS50-207ENST00000458530 CYP1B1Q16678 543 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 USP41Q3LFD5 358 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 SLC25A52Q3SY17 297 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 SLC39A12Q504Y0 691 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 KIAA1841Q6NSI8 718 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 FAM117BQ6P1L5 589 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 SPOCD1Q6ZMY3 1216 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 SND1Q7KZF4 910 aaKnown RBP eCLIP9.32□□□□□ -0.92
VPS50-207ENST00000458530 BEND5Q7L4P6 421 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 CEP57Q86XR8 500 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 KCTD6Q8NC69 237 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 FAM172AQ8WUF8 416 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 HNRNPLLQ8WVV9 542 aaKnown RBP9.32□□□□□ -0.92
VPS50-207ENST00000458530 TSC1Q92574 1164 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 MAGOHBQ96A72 148 aaKnown RBP9.32□□□□□ -0.92
VPS50-207ENST00000458530 TMEM169Q96HH4 297 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 C8orf48Q96LL4 319 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 SLC2A13Q96QE2 648 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 DDX23Q9BUQ8 820 aaKnown RBP9.32□□□□□ -0.92
VPS50-207ENST00000458530 ULBP1Q9BZM6 244 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 FAM129AQ9BZQ8 928 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 LMAN2LQ9H0V9 348 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 FBXO44Q9H4M3 255 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 ZWILCHQ9H900 591 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 COMMD8Q9NX08 183 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 MARCH5Q9NX47 278 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 CLDND1Q9NY35 253 aa9.32□□□□□ -0.92
VPS50-207ENST00000458530 EPG5Q9HCE0 2579 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 GFRA3O60609 400 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 ZNF189O75820 626 aaPredicted RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 RTN3O95197 1032 aaPredicted RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 LTFP02788 710 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 RB1P06400 928 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 RALAP11233 206 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 SULT1E1P49888 294 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 GATMP50440 423 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 ZNF135P52742 658 aaPredicted RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 RPL10AP62906 217 aaKnown RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 ZXDAP98168 799 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 ATP11AP98196 1134 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 DR1Q01658 176 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 ADCY1Q08828 1119 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 ADAM15Q13444 863 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 CAMK1Q14012 370 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 MRPL58Q14197 206 aaKnown RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 BTG3Q14201 252 aaPredicted RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 CDO1Q16878 200 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 CCDC14Q49A88 953 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 FBXO38Q6PIJ6 1188 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 KCNT2Q6UVM3 1135 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 CCDC105Q8IYK2 499 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 FBXL6Q8N531 539 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 CCHCR1Q8TD31 782 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 CENPIQ92674 756 aaPredicted RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 CLP1Q92989 425 aaKnown RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 ZNF689Q96CS4 500 aaPredicted RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 ASIC4Q96FT7 647 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 IGSF21Q96ID5 467 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 CFAP57Q96MR6 1250 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms