RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DEFB106AQ8N104 65 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 OLFM3Q96PB7 478 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 RXFP1Q9HBX9 757 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 SCN10AQ9Y5Y9 1956 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 CYB561D2O14569 222 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 FAM155BO75949 473 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 UBOX5O94941 541 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 GSTA2P09210 222 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 PTPN1P18031 435 aaKnown RBP17.28■□□□□ 0.36
CCDC43-202ENST00000457422 SULT1E1P49888 294 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 MRPS5P82675 430 aaKnown RBP17.28■□□□□ 0.36
CCDC43-202ENST00000457422 DNAJC3Q13217 504 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 PTK7Q13308 1070 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 HHATQ5VTY9 493 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 OTUD1Q5VV17 481 aaPredicted RBP17.28■□□□□ 0.36
CCDC43-202ENST00000457422 WSCD1Q658N2 575 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 LVRNQ6Q4G3 990 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 PAQR9Q6ZVX9 377 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 SUGP1Q8IWZ8 645 aaKnown RBP17.28■□□□□ 0.36
CCDC43-202ENST00000457422 VPS52Q8N1B4 723 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 CCDC33Q8N5R6 958 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 LRRC8CQ8TDW0 803 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 SLC38A7Q9NVC3 462 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 DTLQ9NZJ0 730 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 CACNG4Q9UBN1 327 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 PHTF1Q9UMS5 762 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 TTLL3Q9Y4R7 772 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 MEIS3P2A8K0S8 358 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 HACD1B0YJ81 288 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 TRDMT1O14717 391 aaKnown RBP17.27■□□□□ 0.36
CCDC43-202ENST00000457422 KPNA6O60684 536 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 EDF1O60869 148 aaKnown RBP17.27■□□□□ 0.36
CCDC43-202ENST00000457422 APRTP07741 180 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 AKR1A1P14550 325 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 NOS2P35228 1153 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 MRPS6P82932 125 aaKnown RBP17.27■□□□□ 0.36
CCDC43-202ENST00000457422 CCDC15Q0P6D6 951 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 KCNT2Q6UVM3 1135 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 FAM47EQ6ZV65 393 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 BZW1Q7L1Q6 419 aaKnown RBP17.27■□□□□ 0.36
CCDC43-202ENST00000457422 FAM131BQ86XD5 332 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 PYROXD2Q8N2H3 581 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 SPOCK2Q92563 424 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 FAM149B1Q96BN6 582 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 CFAP36Q96G28 342 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 KLC4Q9NSK0 619 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 GGT7Q9UJ14 662 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 ZNF180Q9UJW8 692 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 MFHAS1Q9Y4C4 1052 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 CDY2AQ9Y6F7 541 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 IKBKGQ9Y6K9 419 aa17.27■□□□□ 0.36
CCDC43-202ENST00000457422 DGKIO75912 1065 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 BEST1O76090 585 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 INHBAP08476 426 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 PRKCHP24723 683 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 ARL4AP40617 200 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 SLC18A2Q05940 514 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 MGAT5Q09328 741 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 BNIP1Q12981 228 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 SEMA5AQ13591 1074 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 FAM133BQ5BKY9 247 aaKnown RBP17.27■□□□□ 0.35
CCDC43-202ENST00000457422 CLEC20AQ6ZU45 233 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 ZNF534Q76KX8 674 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 TRPV1Q8NER1 839 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 RMDN2Q96LZ7 410 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 SLC2A13Q96QE2 648 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 NPY6RQ99463 290 aa17.27■□□□□ 0.35
CCDC43-202ENST00000457422 ZC3H7BQ9UGR2 993 aaKnown RBP17.27■□□□□ 0.35
CCDC43-202ENST00000457422 SF3B1O75533 1304 aaKnown RBP eCLIP17.27■□□□□ 0.35
CCDC43-202ENST00000457422 CFAP73A6NFT4 308 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 TNPO2O14787 897 aaKnown RBP17.26■□□□□ 0.35
CCDC43-202ENST00000457422 DUSP11O75319 330 aaKnown RBP17.26■□□□□ 0.35
CCDC43-202ENST00000457422 METTL18O95568 372 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 C6orf222P0C671 652 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-202ENST00000457422 RARBP10826 455 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 ALADP13716 330 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 GOT1P17174 413 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 AMPD1P23109 780 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 PITX1P78337 314 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-202ENST00000457422 MDH1BQ5I0G3 518 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 KIAA0319Q5VV43 1072 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 HEATR6Q6AI08 1181 aaKnown RBP17.26■□□□□ 0.35
CCDC43-202ENST00000457422 SH2D5Q6ZV89 423 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 SLC26A11Q86WA9 606 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 ZNF276Q8N554 614 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 FITM2Q8N6M3 262 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 GSTCDQ8NEC7 633 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 TCP10LQ8TDR4 215 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 TSPYL2Q9H2G4 693 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-202ENST00000457422 PLAC1Q9HBJ0 212 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 TMEM51Q9NW97 253 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 STAP1Q9ULZ2 295 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 TRPV2Q9Y5S1 764 aa17.26■□□□□ 0.35
CCDC43-202ENST00000457422 M0QZ92 97 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 MT-ND3P03897 115 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 DCAF6Q58WW2 860 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 CYB5D1Q6P9G0 228 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 ECHDC2Q86YB7 292 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 HACE1Q8IYU2 909 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 TMEM86AQ8N2M4 240 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms