RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 GABBR2O75899 941 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 YWHAGP61981 247 aaKnown RBP eCLIP16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 FKBP3Q00688 224 aaKnown RBP16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 GEN1Q17RS7 908 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 UAP1L1Q3KQV9 507 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 RAB41Q5JT25 222 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 FYB2Q5VWT5 728 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 KLHL10Q6JEL2 608 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 KLHDC10Q6PID8 442 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 UBR7Q8N806 425 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 ANKRD52Q8NB46 1076 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 SPATA20Q8TB22 786 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 IPO4Q8TEX9 1081 aaKnown RBP16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 TFAP2BQ92481 460 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 EDEM1Q92611 657 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 CLIC5Q9NZA1 410 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 MARCH2Q9P0N8 246 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 WDR35Q9P2L0 1181 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 MAN1B1Q9UKM7 699 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 CYP8B1Q9UNU6 501 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 STARD13Q9Y3M8 1113 aa16.02■□□□□ 0.16
CROCCP4-201ENST00000457096 NUP205Q92621 2012 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 RNF225M0QZC1 329 aaPredicted RBP16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 SLC16A3O15427 465 aaKnown RBP16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 STX10O60499 249 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 TSPAN3O60637 253 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 GADD45BO75293 160 aaPredicted RBP16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 TOP3BO95985 862 aaKnown RBP16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 BMP6P22004 513 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 MAPK8P45983 427 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 RGS7P49802 495 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 RPL6Q02878 288 aaKnown RBP16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 ADIGQ0VDE8 80 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 TRIM61Q5EBN2 209 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 RSRC2Q7L4I2 434 aaKnown RBP16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 OR2I1PQ8NGU4 316 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 SORCS1Q8WY21 1168 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 GSDMAQ96QA5 445 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 ZSWIM1Q9BR11 485 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 ARMCX3Q9UH62 379 aaPredicted RBP16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 SFMBT1Q9UHJ3 866 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 COQ4Q9Y3A0 265 aa16.01■□□□□ 0.15
CROCCP4-201ENST00000457096 MYO18AQ92614 2054 aaKnown RBP16■□□□□ 0.15
CROCCP4-201ENST00000457096 IGHV1OR15-9A0A0B4J2B8 117 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 BIN1O00499 593 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 MSI1O43347 362 aaKnown RBP16■□□□□ 0.15
CROCCP4-201ENST00000457096 SMC2O95347 1197 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 ZBED1O96006 694 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 PENKP01210 267 aaPredicted RBP16■□□□□ 0.15
CROCCP4-201ENST00000457096 LCP1P13796 627 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 SPINK2P20155 84 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 PMLP29590 882 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 PSEN1P49768 467 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 NOVA1P51513 510 aaKnown RBP16■□□□□ 0.15
CROCCP4-201ENST00000457096 MFAP3P55082 362 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 COBLL1Q53SF7 1204 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 SGO2Q562F6 1265 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 LYSMD4Q5XG99 296 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 KIAA1324Q6UXG2 1013 aaKnown RBP16■□□□□ 0.15
CROCCP4-201ENST00000457096 TRMT11Q7Z4G4 463 aaKnown RBP16■□□□□ 0.15
CROCCP4-201ENST00000457096 C11orf74Q86VG3 221 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 SLC41A1Q8IVJ1 513 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 FBXO10Q9UK96 956 aa16■□□□□ 0.15
CROCCP4-201ENST00000457096 TNRC6BQ9UPQ9 1833 aaKnown RBP16■□□□□ 0.15
CROCCP4-201ENST00000457096 YJEFN3A6XGL0 299 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 E7ENQ6 273 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 O00370 1275 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 XPO1O14980 1071 aaKnown RBP15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 BRD2P25440 801 aaKnown RBP15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 IL12RB1P42701 662 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 FMO5P49326 533 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 SGSHP51688 502 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 BCAT1P54687 386 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 STX17P56962 302 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 COG7P83436 770 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 PREPLQ4J6C6 727 aaPredicted RBP15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 SH3PXD2AQ5TCZ1 1133 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 TMEM215Q68D42 235 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 PM20D1Q6GTS8 502 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 TMEM270Q6UE05 265 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 CACUL1Q86Y37 369 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 FMNL3Q8IVF7 1028 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 ARHGEF19Q8IW93 802 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 CLEC4CQ8WTT0 213 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 DDX1Q92499 740 aaKnown RBP15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 CCDC34Q96HJ3 373 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 MRGPRX1Q96LB2 322 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 GABRG3Q99928 467 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 UBXN6Q9BZV1 441 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 LRRC4Q9HBW1 653 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 TMEM9BQ9NQ34 198 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 STON1Q9Y6Q2 735 aa15.99■□□□□ 0.15
CROCCP4-201ENST00000457096 PPP1R3GB7ZBB8 358 aa15.98■□□□□ 0.15
CROCCP4-201ENST00000457096 CFIP05156 583 aa15.98■□□□□ 0.15
CROCCP4-201ENST00000457096 ENGP17813 658 aa15.98■□□□□ 0.15
CROCCP4-201ENST00000457096 LRRC63Q05C16 580 aa15.98■□□□□ 0.15
CROCCP4-201ENST00000457096 BST2Q10589 180 aaKnown RBP15.98■□□□□ 0.15
CROCCP4-201ENST00000457096 FUT11Q495W5 492 aa15.98■□□□□ 0.15
CROCCP4-201ENST00000457096 CCDC40Q4G0X9 1142 aa15.98■□□□□ 0.15
CROCCP4-201ENST00000457096 BSPRYQ5W0U4 402 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms