RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 C9orf57Q5W0N0 161 aa12.67□□□□□ -0.38
SEMA4D-213ENST00000455551 TTC7BQ86TV6 843 aa12.67□□□□□ -0.38
SEMA4D-213ENST00000455551 NT5DC4Q86YG4 428 aa12.67□□□□□ -0.38
SEMA4D-213ENST00000455551 SLC2A14Q8TDB8 520 aa12.67□□□□□ -0.38
SEMA4D-213ENST00000455551 LENG1Q96BZ8 264 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-213ENST00000455551 LBHD1Q9BQE6 289 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-213ENST00000455551 SPTLC1O15269 473 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 APOEP02649 317 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 DHRS4L1P0CG22 281 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 CASC4Q6P4E1 433 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 ZNF534Q76KX8 674 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 CSPG4P5Q96PW8 444 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 LGMNQ99538 433 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 GCOM2Q9BZD3 368 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 ARL8BQ9NVJ2 186 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 MARCOQ9UEW3 520 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 FAM237BA0A1B0GVD1 139 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 HAUS5O94927 633 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 GM2AP17900 193 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 PITX1P78337 314 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 C9orf131Q5VYM1 1079 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 ZNF410Q86VK4 478 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 ADAMTS10Q9H324 1103 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 MTMR10Q9NXD2 777 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 SETSIPP0DME0 302 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 KITP10721 976 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 MYL2P10916 166 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 GNL1P36915 607 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 BST2Q10589 180 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 PRKD1Q15139 912 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 PRAMEF19Q5SWL8 479 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 KBTBD7Q8WVZ9 684 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 INPP5DQ92835 1189 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 MYCBPQ99417 103 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 KCNK13Q9HB14 408 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 SEPT10Q9P0V9 454 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 ARMCX1Q9P291 453 aa12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 PIN4Q9Y237 131 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-213ENST00000455551 EPHX2P34913 555 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 RABGGTBP53611 331 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 CLNS1AP54105 237 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 MRPS5P82675 430 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 DPYSL2Q16555 572 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 DGKDQ16760 1214 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 CTC1Q2NKJ3 1217 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 PARP6Q2NL67 630 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 FBXO47Q5MNV8 452 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 NOTUMQ6P988 496 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 CHSY1Q86X52 802 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 TTC8Q8TAM2 541 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 MIPEPQ99797 713 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 SNX25Q9H3E2 840 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 PNPLA8Q9NP80 782 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 DTLQ9NZJ0 730 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 DYNC1LI2O43237 492 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 ENTPD5O75356 428 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 VAV1P15498 845 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 CDC25CP30307 473 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 BCAT1P54687 386 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 TMPRSS15P98073 1019 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 TLDC1Q6P9B6 456 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 SLC26A9Q7LBE3 791 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 DEPDC1BQ8WUY9 529 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 PLXNB2O15031 1838 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 LOC102724159A0A0B4J2E5 919 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 BTBD19C9JJ37 291 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 CLDN5O00501 218 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 RFPL1O75677 317 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 PRKCHP24723 683 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 ACAT1P24752 427 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 RASSF2P50749 326 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 PWP2Q15269 919 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 ZBTB6Q15916 424 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 DUSP28Q4G0W2 176 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 NCBP2-AS2Q69YL0 99 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 SMYD5Q6GMV2 418 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 RFWD3Q6PCD5 774 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 ALYREFQ86V81 257 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 NDUFAF2Q8N183 169 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 ANKRD52Q8NB46 1076 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 TMEM40Q8WWA1 233 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 EMID1Q96A84 441 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 CXorf56Q9H5V9 222 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 PLEKHA5Q9HAU0 1116 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 CNTN3Q9P232 1028 aa12.65□□□□□ -0.38
SEMA4D-213ENST00000455551 WDR27A2RRH5 827 aa12.64□□□□□ -0.39
SEMA4D-213ENST00000455551 KPNA7A9QM74 516 aa12.64□□□□□ -0.39
SEMA4D-213ENST00000455551 GPR32O75388 356 aa12.64□□□□□ -0.39
SEMA4D-213ENST00000455551 DLDP09622 509 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-213ENST00000455551 CYP2C9P11712 490 aa12.64□□□□□ -0.39
SEMA4D-213ENST00000455551 PTPN4P29074 926 aa12.64□□□□□ -0.39
SEMA4D-213ENST00000455551 PTPN9P43378 593 aa12.64□□□□□ -0.39
SEMA4D-213ENST00000455551 CPA2P48052 419 aa12.64□□□□□ -0.39
SEMA4D-213ENST00000455551 SULT1E1P49888 294 aa12.64□□□□□ -0.39
SEMA4D-213ENST00000455551 SESN2P58004 480 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms