RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 F9P00740 461 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 FOSL2P15408 326 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 GJA1P17302 382 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 COMTP21964 271 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 MSNP26038 577 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 RDXP35241 583 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 CDO1Q16878 200 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 TXNDC8Q6A555 127 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 NYAP1Q6ZVC0 841 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 CPNE8Q86YQ8 564 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 ADAM32Q8TC27 787 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 SERPINB11Q96P15 392 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 APOL5Q9BWW9 433 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 FAM204AQ9H8W3 233 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 WDR6Q9NNW5 1121 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 DDIT4Q9NX09 232 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 MARCH2Q9P0N8 246 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 SFMBT1Q9UHJ3 866 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 ZMYM5Q9UJ78 669 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 DNMT3LQ9UJW3 386 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 EYSQ5T1H1 3165 aa17.29■□□□□ 0.36
CCDC90B-202ENST00000455220 MDM4O15151 490 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 EFEMP1Q12805 493 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 TEAD2Q15562 447 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 ARHGAP15Q53QZ3 475 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 RAB6CQ53S08 254 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 STXBP5Q5T5C0 1151 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 CES5AQ6NT32 575 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 CC2D1AQ6P1N0 951 aaPredicted RBP17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 NT5DC3Q86UY8 548 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 SMRP1Q8NCR6 262 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 UBE2Q2Q8WVN8 375 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 CD101Q93033 1021 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 RNF38Q9H0F5 515 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 RAB6CQ9H0N0 254 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 PIGVQ9NUD9 493 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 MRPS23Q9Y3D9 190 aaKnown RBP17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 XIRP2A4UGR9 3374 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 MIPP30301 263 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 GBP1P32455 592 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 CXCR3P49682 368 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 ATXN1P54253 815 aaKnown RBP17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 DEUP1Q05D60 604 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 ZNF569Q5MCW4 686 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 DAB2IPQ5VWQ8 1189 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 ITFG1Q8TB96 612 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 SLC39A13Q96H72 371 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 SLC22A12Q96S37 553 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 SLC46A2Q9BY10 475 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 TASP1Q9H6P5 420 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 TRPC7Q9HCX4 862 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 CDH22Q9UJ99 828 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 RASAL2Q9UJF2 1139 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 USTQ9Y2C2 406 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 TLR6Q9Y2C9 796 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 HYOU1Q9Y4L1 999 aa17.28■□□□□ 0.36
CCDC90B-202ENST00000455220 DENND4AQ7Z401 1863 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 ESPNB1AK53 854 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 MSI1O43347 362 aaKnown RBP17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 SPOPO43791 374 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 IGLV3-27P01718 113 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 CEBPBP17676 345 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 KPNA1P52294 538 aaPredicted RBP17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 SLC7A9P82251 487 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 SLC25A11Q02978 314 aaKnown RBP17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 NME3Q13232 169 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 TRIP4Q15650 581 aaPredicted RBP17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 ATAT1Q5SQI0 421 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 GPR158Q5T848 1215 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 EP400NLQ6ZTU2 488 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 MIB1Q86YT6 1006 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 SLC35F6Q8N357 371 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 ARL14EPQ8N8R7 260 aaPredicted RBP17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 MAB21L3Q8N8X9 362 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 ZFRQ96KR1 1074 aaKnown RBP17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 NACA2Q9H009 215 aa17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 HBS1LQ9Y450 684 aaKnown RBP17.27■□□□□ 0.35
CCDC90B-202ENST00000455220 TRAV19A0A0A6YYK7 116 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 FTCDO95954 541 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 TCF4P15884 667 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 HDCP19113 662 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 FSHRP23945 695 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 MTHFRP42898 656 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 TAS2R40P59535 323 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 GNG11P61952 73 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 RING1Q06587 406 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 PPP2R5DQ14738 602 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 MEI1Q5TIA1 1274 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 LRRC38Q5VT99 294 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 POTEHQ6S545 545 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 CYP4V2Q6ZWL3 525 aaPredicted RBP17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 PEX26Q7Z412 305 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 FCRL2Q96LA5 508 aaPredicted RBP17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 RIPOR3Q96MK2 946 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 PEBP4Q96S96 227 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 CYP2S1Q96SQ9 504 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 KLF16Q9BXK1 252 aaPredicted RBP17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 AMFRQ9UKV5 643 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms