RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 TMEM121BQ9BXQ6 578 aaPredicted RBP16.86■□□□□ 0.29
GPC1-206ENST00000455111 SCAND2PQ9GZW5 306 aaPredicted RBP16.86■□□□□ 0.29
GPC1-206ENST00000455111 CLIC5Q9NZA1 410 aa16.86■□□□□ 0.29
GPC1-206ENST00000455111 BCCIPQ9P287 314 aaKnown RBP eCLIP16.86■□□□□ 0.29
GPC1-206ENST00000455111 RASAL2Q9UJF2 1139 aa16.86■□□□□ 0.29
GPC1-206ENST00000455111 AGO1Q9UL18 857 aaKnown RBP16.86■□□□□ 0.29
GPC1-206ENST00000455111 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
GPC1-206ENST00000455111 AKAP13Q12802 2813 aa16.86■□□□□ 0.29
GPC1-206ENST00000455111 GFRA2O00451 464 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 KIF20AO95235 890 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 CALCAP01258 141 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 HMBSP08397 361 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
GPC1-206ENST00000455111 SPINK2P20155 84 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 RPL13P26373 211 aaKnown RBP16.85■□□□□ 0.29
GPC1-206ENST00000455111 DGKGP49619 791 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 NOVA1P51513 510 aaKnown RBP16.85■□□□□ 0.29
GPC1-206ENST00000455111 MFAP3P55082 362 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 EFEMP1Q12805 493 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 ENPP2Q13822 863 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 COBLL1Q53SF7 1204 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 SH3PXD2AQ5TCZ1 1133 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 TMEM215Q68D42 235 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 SLC23A3Q6PIS1 610 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 PGBD3Q8N328 593 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 OR2I1PQ8NGU4 316 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 PIWIL1Q96J94 861 aaKnown RBP16.85■□□□□ 0.29
GPC1-206ENST00000455111 HEXIM2Q96MH2 286 aaKnown RBP16.85■□□□□ 0.29
GPC1-206ENST00000455111 IMPG2Q9BZV3 1241 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 TMEM9BQ9NQ34 198 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 ANGPTL2Q9UKU9 493 aa16.85■□□□□ 0.29
GPC1-206ENST00000455111 CACNA1BQ00975 2339 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 ENGP17813 658 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 CORO1AP31146 461 aaKnown RBP16.84■□□□□ 0.29
GPC1-206ENST00000455111 IL12RB1P42701 662 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 PDE4CQ08493 712 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 ST3GAL2Q16842 350 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 PM20D1Q6GTS8 502 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 SYT12Q8IV01 421 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 FAM217AQ8IXS0 508 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 SLC35C1Q96A29 364 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 MRGPRX1Q96LB2 322 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
GPC1-206ENST00000455111 ULBP1Q9BZM6 244 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 UBXN6Q9BZV1 441 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 CAPN10Q9HC96 672 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 WDR35Q9P2L0 1181 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 LSM7Q9UK45 103 aaKnown RBP16.84■□□□□ 0.29
GPC1-206ENST00000455111 CYP8B1Q9UNU6 501 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 SLC27A6Q9Y2P4 619 aa16.84■□□□□ 0.29
GPC1-206ENST00000455111 CFAP47Q6ZTR5 3102 aa16.83■□□□□ 0.29
GPC1-206ENST00000455111 RNF225M0QZC1 329 aaPredicted RBP16.83■□□□□ 0.28
GPC1-206ENST00000455111 BMP6P22004 513 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 PSEN1P49768 467 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 TKTL1P51854 596 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 YWHAGP61981 247 aaKnown RBP eCLIP16.83■□□□□ 0.28
GPC1-206ENST00000455111 GOLGA7BQ2TAP0 167 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 GON4LQ3T8J9 2241 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 PKDCCQ504Y2 493 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 ZNF658Q5TYW1 1059 aaPredicted RBP16.83■□□□□ 0.28
GPC1-206ENST00000455111 LYSMD4Q5XG99 296 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 CHPFQ8IZ52 775 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 ANKRD52Q8NB46 1076 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 DEFB124Q8NES8 71 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 TFAP2BQ92481 460 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 KAT5Q92993 513 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 FAXDC2Q96IV6 333 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 SPACA7Q96KW9 195 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 TSPAN16Q9UKR8 245 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 STON1Q9Y6Q2 735 aa16.83■□□□□ 0.28
GPC1-206ENST00000455111 KCNJ18B7U540 433 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 CETN3O15182 167 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 MAP3K13O43283 966 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 CSRP1P21291 193 aaKnown RBP16.82■□□□□ 0.28
GPC1-206ENST00000455111 MAPK8P45983 427 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 SGSHP51688 502 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 FAM193AP78312 1265 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 RPL6Q02878 288 aaKnown RBP16.82■□□□□ 0.28
GPC1-206ENST00000455111 ZNF33AQ06730 810 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 ZNF252P-AS1Q0IIN9 211 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 CUL2Q13617 745 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 UAP1L1Q3KQV9 507 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 FUT11Q495W5 492 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 DCAF17Q5H9S7 520 aaPredicted RBP16.82■□□□□ 0.28
GPC1-206ENST00000455111 SPDYCQ5MJ68 293 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 TRMT11Q7Z4G4 463 aaKnown RBP16.82■□□□□ 0.28
GPC1-206ENST00000455111 PIP4P1Q86T03 277 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 DENND1CQ8IV53 801 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 LMO3Q8TAP4 145 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 SORCS1Q8WY21 1168 aa16.82■□□□□ 0.28
GPC1-206ENST00000455111 CCDC47Q96A33 483 aaKnown RBP16.82■□□□□ 0.28
GPC1-206ENST00000455111 MKRN2Q9H000 416 aaKnown RBP16.82■□□□□ 0.28
GPC1-206ENST00000455111 THAP10Q9P2Z0 257 aaPredicted RBP16.82■□□□□ 0.28
GPC1-206ENST00000455111 SLC12A8A0AV02 714 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 YJEFN3A6XGL0 299 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 C1QTNF9BB2RNN3 333 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 E7ENQ6 273 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 O00370 1275 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 SLC16A3O15427 465 aaKnown RBP16.81■□□□□ 0.28
GPC1-206ENST00000455111 C1QTNF9P0C862 333 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms