RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 SNX15Q9NRS6 342 aa5.43□□□□□ -1.54
USP25-206ENST00000453553 ARPP21Q9UBL0 812 aaPredicted RBP5.43□□□□□ -1.54
USP25-206ENST00000453553 AQP12BA6NM10 295 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 TARM1B6A8C7 271 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 DHHO43323 396 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 C1QL1O75973 258 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 ELLP55199 621 aaPredicted RBP5.42□□□□□ -1.54
USP25-206ENST00000453553 GALNT1Q10472 559 aaPredicted RBP5.42□□□□□ -1.54
USP25-206ENST00000453553 FOXD4Q12950 439 aaPredicted RBP5.42□□□□□ -1.54
USP25-206ENST00000453553 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 AASDHQ4L235 1098 aaPredicted RBP5.42□□□□□ -1.54
USP25-206ENST00000453553 KIRREL2Q6UWL6 708 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 AMIGO2Q86SJ2 522 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 TTC30AQ86WT1 665 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 PNPLA1Q8N8W4 532 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 TEX19Q8NA77 164 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 STYXQ8WUJ0 223 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 MACROD1Q9BQ69 325 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 CIPCQ9C0C6 399 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 EPS8L2Q9H6S3 715 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 RXFP3Q9NSD7 469 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 SAGE1Q9NXZ1 904 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 TFCP2L1Q9NZI6 479 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 WNT6Q9Y6F9 365 aa5.42□□□□□ -1.54
USP25-206ENST00000453553 PNMA6EA0A0J9YXQ4 647 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 hCG_1642624A0A1W2PR95 340 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 J3KTA2 159 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 CA12O43570 354 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 EXOC3O60645 756 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 PROP1O75360 226 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 USP1O94782 785 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 CSTBP04080 98 aaKnown RBP5.41□□□□□ -1.54
USP25-206ENST00000453553 ANXA6P08133 673 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 ITGA5P08648 1049 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 DNASE1L3Q13609 305 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 BLMHQ13867 455 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 CCDC38Q502W7 563 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 TMEM196Q5HYL7 178 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 FBXO42Q6P3S6 717 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 LDHAL6AQ6ZMR3 332 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 TRIM72Q6ZMU5 477 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 P3H2Q8IVL5 708 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 NME8Q8N427 588 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 MYCT1Q8N699 235 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 C12orf76Q8N812 135 aaPredicted RBP5.41□□□□□ -1.54
USP25-206ENST00000453553 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.41□□□□□ -1.54
USP25-206ENST00000453553 BOLLQ8N9W6 283 aaKnown RBP5.41□□□□□ -1.54
USP25-206ENST00000453553 ATG16L2Q8NAA4 619 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 SPATA5Q8NB90 893 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 EID2BQ96D98 161 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 DAZAP1Q96EP5 407 aaKnown RBP5.41□□□□□ -1.54
USP25-206ENST00000453553 SNX18Q96RF0 628 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 MAP3K20Q9NYL2 800 aaKnown RBP5.41□□□□□ -1.54
USP25-206ENST00000453553 C9orf78Q9NZ63 289 aaPredicted RBP5.41□□□□□ -1.54
USP25-206ENST00000453553 SH3BP4Q9P0V3 963 aa5.41□□□□□ -1.54
USP25-206ENST00000453553 SCAF8Q9UPN6 1271 aaKnown RBP5.41□□□□□ -1.54
USP25-206ENST00000453553 PCDH17O14917 1159 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 TAF5LO75529 589 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 ZNF37AP17032 561 aaPredicted RBP5.4□□□□□ -1.54
USP25-206ENST00000453553 DRD1P21728 446 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 SERPINF1P36955 418 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 GRK6P43250 576 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 GSTM5P46439 218 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 COPB1P53618 953 aaKnown RBP5.4□□□□□ -1.54
USP25-206ENST00000453553 SEMA3BQ13214 749 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 MAPRE1Q15691 268 aaKnown RBP5.4□□□□□ -1.54
USP25-206ENST00000453553 SLC4A8Q2Y0W8 1093 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 TMEM63BQ5T3F8 832 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 FAM90A2PQ658T7 463 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 BCDIN3DQ7Z5W3 292 aaKnown RBP5.4□□□□□ -1.54
USP25-206ENST00000453553 GATAD2AQ86YP4 633 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 FAM71DQ8N9W8 422 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 OVCA2Q8WZ82 227 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 ZG16BQ96DA0 208 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 PRR11Q96HE9 360 aaPredicted RBP5.4□□□□□ -1.54
USP25-206ENST00000453553 RMDN3Q96TC7 470 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 FSCN3Q9NQT6 498 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 ZNF69Q9UC07 566 aa5.4□□□□□ -1.54
USP25-206ENST00000453553 FBXO9Q9UK97 447 aaPredicted RBP5.4□□□□□ -1.54
USP25-206ENST00000453553 LRRC3CA6NJW4 275 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 H7C1Q1 480 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 SYT5O00445 386 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 DNPH1O43598 174 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 ASNA1O43681 348 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 TNFRSF6BO95407 300 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 MT-CO3P00414 261 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 APEHP13798 732 aaKnown RBP5.39□□□□□ -1.55
USP25-206ENST00000453553 BDNFP23560 247 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 CCT5P48643 541 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 ALDH18A1P54886 795 aaKnown RBP5.39□□□□□ -1.55
USP25-206ENST00000453553 TXNL4AP83876 142 aaKnown RBP5.39□□□□□ -1.55
USP25-206ENST00000453553 CFHR3Q02985 330 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 CCDC15Q0P6D6 951 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 BFSP2Q13515 415 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 CSHL1Q14406 222 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 GRM4Q14833 912 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 CCDC144NLQ6NUI1 221 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 MMS22LQ6ZRQ5 1243 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 PIK3AP1Q6ZUJ8 805 aa5.39□□□□□ -1.55
USP25-206ENST00000453553 NRSN1Q8IZ57 195 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms