RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 BHMTQ93088 406 aa16■□□□□ 0.15
CHD3-205ENST00000449744 CNGB3Q9NQW8 809 aa16■□□□□ 0.15
CHD3-205ENST00000449744 INVSQ9Y283 1065 aa16■□□□□ 0.15
CHD3-205ENST00000449744 PCDHGA5Q9Y5G8 931 aa16■□□□□ 0.15
CHD3-205ENST00000449744 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 MED19A0JLT2 244 aaPredicted RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 RNF225M0QZC1 329 aaPredicted RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 TRIM24O15164 1050 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 ZBTB24O43167 697 aaPredicted RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 KLKB1P03952 638 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 CYBBP04839 570 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 BRD2P25440 801 aaKnown RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 ANP32AP39687 249 aaKnown RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 RGS7P49802 495 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 TPD52L1Q16890 204 aaPredicted RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 AASDHQ4L235 1098 aaPredicted RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 PKDCCQ504Y2 493 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 BSPRYQ5W0U4 402 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 DENND1CQ8IV53 801 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 NETO1Q8TDF5 533 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 GOLGA1Q92805 767 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 PLD4Q96BZ4 506 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 RTKNQ9BST9 563 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 INTS2Q9H0H0 1204 aaKnown RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 DUSP15Q9H1R2 295 aaPredicted RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 ABCC13Q9NSE7 274 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 PLK2Q9NYY3 685 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 AGO1Q9UL18 857 aaKnown RBP15.99■□□□□ 0.15
CHD3-205ENST00000449744 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.99■□□□□ 0.15
CHD3-205ENST00000449744 CEP250Q9BV73 2442 aa15.99■□□□□ 0.15
CHD3-205ENST00000449744 TCRBV21S2A2A0A5A6 115 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 ADAM23O75077 832 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 CHRM1P11229 460 aaPredicted RBP15.98■□□□□ 0.15
CHD3-205ENST00000449744 KRT5P13647 590 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 HOXB2P14652 356 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 HNRNPLP14866 589 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHD3-205ENST00000449744 NTSR1P30989 418 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 MPLP40238 635 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 HARS2P49590 506 aaKnown RBP15.98■□□□□ 0.15
CHD3-205ENST00000449744 ATXN1P54253 815 aaKnown RBP15.98■□□□□ 0.15
CHD3-205ENST00000449744 CCDC6Q16204 474 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 RALGAPA1Q6GYQ0 2036 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 BHLHA9Q7RTU4 235 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 FMNL3Q8IVF7 1028 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 CHPFQ8IZ52 775 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 SCML4Q8N228 414 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 MLKLQ8NB16 471 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 SLC35F5Q8WV83 523 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 HMGB4Q8WW32 186 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 EDEM1Q92611 657 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 SPACA7Q96KW9 195 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 UBE2TQ9NPD8 197 aaPredicted RBP15.98■□□□□ 0.15
CHD3-205ENST00000449744 STARD13Q9Y3M8 1113 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 HBS1LQ9Y450 684 aaKnown RBP15.98■□□□□ 0.15
CHD3-205ENST00000449744 WDR87Q6ZQQ6 2873 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 EML5Q05BV3 1969 aa15.98■□□□□ 0.15
CHD3-205ENST00000449744 SPAG17Q6Q759 2223 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 YJEFN3A6XGL0 299 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 E7ENQ6 273 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 PIK3R2O00459 728 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 ZNF806P0C7X5 589 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 WASP42768 502 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 DAOAP59103 153 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 CREB5Q02930 508 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 BYSLQ13895 437 aaKnown RBP15.97■□□□□ 0.15
CHD3-205ENST00000449744 EGFLAMQ63HQ2 1017 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 PMF1Q6P1K2 205 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 TOGARAM2Q6ZUX3 1019 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 CPXM2Q8N436 756 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 IRGQQ8WZA9 623 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 HSFY1Q96LI6 401 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 FAM81BQ96LP2 452 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 KREMEN1Q96MU8 473 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 ZSWIM1Q9BR11 485 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 VPS45Q9NRW7 570 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 SFMBT1Q9UHJ3 866 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 DCHS1Q96JQ0 3298 aa15.97■□□□□ 0.15
CHD3-205ENST00000449744 CACNA1AO00555 2505 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 PRRT4C9JH25 899 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 MAP3K13O43283 966 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 MED7O43513 233 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 PENKP01210 267 aaPredicted RBP15.96■□□□□ 0.15
CHD3-205ENST00000449744 CALCAP01258 141 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 CISD3P0C7P0 127 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 MTIF2P46199 727 aaKnown RBP15.96■□□□□ 0.15
CHD3-205ENST00000449744 ZNF132P52740 706 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 MFAP3P55082 362 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 SF3A2Q15428 464 aaKnown RBP15.96■□□□□ 0.15
CHD3-205ENST00000449744 TRIP4Q15650 581 aaPredicted RBP15.96■□□□□ 0.15
CHD3-205ENST00000449744 FYB2Q5VWT5 728 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 PMS2CLQ68D20 193 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 ENOSF1Q7L5Y1 443 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 OLIG1Q8TAK6 271 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 DDI1Q8WTU0 396 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 RLN3Q8WXF3 142 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 CRACR2AQ9BSW2 395 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 MIS12Q9H081 205 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 CLSTN2Q9H4D0 955 aa15.96■□□□□ 0.15
CHD3-205ENST00000449744 SDK1Q7Z5N4 2213 aa15.95■□□□□ 0.14
CHD3-205ENST00000449744 SLC30A4O14863 429 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms