RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 LRG1P02750 347 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 FYNP06241 537 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 RB1P06400 928 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 TGM2P21980 687 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 CCR1P32246 355 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 KPNA1P52294 538 aaPredicted RBP10.06□□□□□ -0.8
RFC4-210ENST00000449502 ZNF135P52742 658 aaPredicted RBP10.06□□□□□ -0.8
RFC4-210ENST00000449502 UBE3AQ05086 875 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 TWF1Q12792 350 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 DPYSL3Q14195 570 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 HLTFQ14527 1009 aaKnown RBP eCLIP10.06□□□□□ -0.8
RFC4-210ENST00000449502 DPYSL2Q16555 572 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 CYP1B1Q16678 543 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 RAB6CQ53S08 254 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 ANKRD20A8PQ5CZ79 823 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 ZC3H12AQ5D1E8 599 aaKnown RBP10.06□□□□□ -0.8
RFC4-210ENST00000449502 BRMS1LQ5PSV4 323 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 C10orf120Q5SQS8 335 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 PLPP4Q5VZY2 271 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 WDR93Q6P2C0 686 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 C1orf228Q6PIY5 440 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 ELMSAN1Q6PJG2 1045 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 BZW1Q7L1Q6 419 aaKnown RBP10.06□□□□□ -0.8
RFC4-210ENST00000449502 BHLHA9Q7RTU4 235 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 SCD5Q86SK9 330 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 CCDC185Q8N715 623 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 C12orf50Q8NA57 414 aaPredicted RBP10.06□□□□□ -0.8
RFC4-210ENST00000449502 CCHCR1Q8TD31 782 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 ATG4AQ8WYN0 398 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 OVCA2Q8WZ82 227 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 P3H4Q92791 437 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 NT5C3BQ969T7 300 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 NTAN1Q96AB6 310 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 HAUS1Q96CS2 278 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 RNF157Q96PX1 679 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 EPAS1Q99814 870 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 FERMT1Q9BQL6 677 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 TKTL2Q9H0I9 626 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 RAB6CQ9H0N0 254 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 CRISPLD1Q9H336 500 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 SMOC2Q9H3U7 446 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 PLEKHA4Q9H4M7 779 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 EPB41L5Q9HCM4 733 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 ARFGAP3Q9NP61 516 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 PIGVQ9NUD9 493 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 RCOR3Q9P2K3 495 aaPredicted RBP10.06□□□□□ -0.8
RFC4-210ENST00000449502 UXTQ9UBK9 157 aaPredicted RBP10.06□□□□□ -0.8
RFC4-210ENST00000449502 FBXW11Q9UKB1 542 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 ZNF148Q9UQR1 794 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 NR2E1Q9Y466 385 aa10.06□□□□□ -0.8
RFC4-210ENST00000449502 PDCD11Q14690 1871 aaKnown RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 LINC01553A4QN01 128 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 CCDC151A5D8V7 595 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 C3orf70A6NLC5 250 aaPredicted RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 SPDYE4A6NLX3 237 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 ZNF487B1APH4 448 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 H7C0C1 242 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 NDC80O14777 642 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 CD48P09326 243 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 CNPP09543 421 aaKnown RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 L1CAMP32004 1257 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 ADRA1BP35368 520 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 MAGEA10P43363 369 aaPredicted RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 TNNT3P45378 269 aaPredicted RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 ATP5OP48047 213 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 KCNJ1P48048 391 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 PPP3CCP48454 512 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 CXCR3P49682 368 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 TBX4P57082 545 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 TPI1P60174 286 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 USP46P62068 366 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 VSNL1P62760 191 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 PITX1P78337 314 aaPredicted RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 EFEMP1Q12805 493 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 MTA1Q13330 715 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 KLF1Q13351 362 aaPredicted RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 MTMR3Q13615 1198 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 CUL1Q13616 776 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 BYSLQ13895 437 aaKnown RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 SIX1Q15475 284 aaPredicted RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 CA9Q16790 459 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 DARS2Q6PI48 645 aaKnown RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 BBS12Q6ZW61 710 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 JAMLQ86YT9 394 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 CCDC89Q8N998 374 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 POF1BQ8WVV4 589 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 RSAD2Q8WXG1 361 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 ANKRD7Q92527 254 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 KLHL5Q96PQ7 755 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 GCNAQ96QF7 691 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 TGS1Q96RS0 853 aaKnown RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 KCTD15Q96SI1 283 aaPredicted RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 PNKPQ96T60 521 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 UBE2OQ9C0C9 1292 aaKnown RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 NMUR1Q9HB89 426 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 ALG13Q9NP73 1137 aaKnown RBP10.05□□□□□ -0.8
RFC4-210ENST00000449502 TLR9Q9NR96 1032 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 FAM114A2Q9NRY5 505 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 IL37Q9NZH6 218 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms