RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 COCHO43405 550 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 TBX10O75333 385 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 TBX18O95935 607 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 F9P00740 461 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 TCF4P15884 667 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 PFKLP17858 780 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 MIPP30301 263 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 GBP1P32455 592 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 ATP5C1P36542 298 aaKnown RBP14.64□□□□□ -0.07
SHMT2-203ENST00000449049 ATXN1P54253 815 aaKnown RBP14.64□□□□□ -0.07
SHMT2-203ENST00000449049 TAS2R40P59535 323 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 CYP4F8P98187 520 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 SLC25A11Q02978 314 aaKnown RBP14.64□□□□□ -0.07
SHMT2-203ENST00000449049 DEUP1Q05D60 604 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 SLC5A9Q2M3M2 681 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 HES6Q96HZ4 224 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 SERPINB11Q96P15 392 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 ATXN3LQ9H3M9 355 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 WDR6Q9NNW5 1121 aaKnown RBP14.64□□□□□ -0.07
SHMT2-203ENST00000449049 PIGVQ9NUD9 493 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 DDIT4Q9NX09 232 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 SFMBT1Q9UHJ3 866 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 DNMT3LQ9UJW3 386 aa14.64□□□□□ -0.07
SHMT2-203ENST00000449049 SOBPA7XYQ1 873 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 MIF4GDA9UHW6 222 aaKnown RBP14.63□□□□□ -0.07
SHMT2-203ENST00000449049 MDM4O15151 490 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 DDX6P26196 483 aaKnown RBP eCLIP14.63□□□□□ -0.073e-6■□□□□ 9.6
SHMT2-203ENST00000449049 CTNNA2P26232 953 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 CTNNA1P35221 906 aaKnown RBP14.63□□□□□ -0.07
SHMT2-203ENST00000449049 NTHL1P78549 312 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 EFEMP1Q12805 493 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 NME3Q13232 169 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 LRRC38Q5VT99 294 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 SYT10Q6XYQ8 523 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 PABPC5Q96DU9 382 aaKnown RBP14.63□□□□□ -0.07
SHMT2-203ENST00000449049 TCEAL4Q96EI5 215 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 MARCH2Q9P0N8 246 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 USP18Q9UMW8 372 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 PACSIN2Q9UNF0 486 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-203ENST00000449049 CDH23Q9H251 3354 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 ZNF197O14709 1029 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 PSTPIP1O43586 416 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 GJA1P17302 382 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 IL1R2P27930 398 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 LTBRP36941 435 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 CXCR3P49682 368 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 HADHQ16836 314 aaKnown RBP14.63□□□□□ -0.07
SHMT2-203ENST00000449049 TXNDC8Q6A555 127 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 CYP4V2Q6ZWL3 525 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-203ENST00000449049 Q7L0L9 218 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 POLNQ7Z5Q5 900 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 RHOT1Q8IXI2 618 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 PEBP4Q96S96 227 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 CDX2Q99626 313 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-203ENST00000449049 TLR10Q9BXR5 811 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 RNF38Q9H0F5 515 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 CLDND1Q9NY35 253 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHMT2-203ENST00000449049 DNAI1Q9UI46 699 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 RASAL2Q9UJF2 1139 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 PRDM4Q9UKN5 801 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 TLR6Q9Y2C9 796 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 MYO7AQ13402 2215 aa14.63□□□□□ -0.07
SHMT2-203ENST00000449049 CCDC66A2RUB6 948 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 DDX3YO15523 660 aaKnown RBP14.62□□□□□ -0.07
SHMT2-203ENST00000449049 MSI1O43347 362 aaKnown RBP14.62□□□□□ -0.07
SHMT2-203ENST00000449049 IGLV3-27P01718 113 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 TNNT1P13805 278 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 ITIH3Q06033 890 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 DLX2Q07687 328 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-203ENST00000449049 TEAD2Q15562 447 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 TRIP4Q15650 581 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-203ENST00000449049 SND1Q7KZF4 910 aaKnown RBP eCLIP14.62□□□□□ -0.072e-6■■□□□ 11.8
SHMT2-203ENST00000449049 FAM131BQ86XD5 332 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 MYLIPQ8WY64 445 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 SLC39A13Q96H72 371 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 NAPGQ99747 312 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-203ENST00000449049 S1PR5Q9H228 398 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 ADAM7Q9H2U9 754 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 TRPC7Q9HCX4 862 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 HBS1LQ9Y450 684 aaKnown RBP14.62□□□□□ -0.07
SHMT2-203ENST00000449049 PCDHA3Q9Y5H8 950 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 CLUHO75153 1309 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 SYNJ2BP-COX16A0A087WUM0 186 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 ENC1O14682 589 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 PRPSAP2O60256 369 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 ATP1A1P05023 1023 aaKnown RBP14.62□□□□□ -0.07
SHMT2-203ENST00000449049 SSR1P43307 286 aaKnown RBP14.62□□□□□ -0.07
SHMT2-203ENST00000449049 KPNA1P52294 538 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-203ENST00000449049 PPP2R5DQ14738 602 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 RPS6KA1Q15418 735 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 ARHGAP15Q53QZ3 475 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 STXBP5Q5T5C0 1151 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 TXNRD3NBQ6F5E7 133 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 MIB1Q86YT6 1006 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 MICALL1Q8N3F8 863 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 KRT35Q92764 455 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 NTAN1Q96AB6 310 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 MSLNLQ96KJ4 702 aa14.62□□□□□ -0.07
SHMT2-203ENST00000449049 GUCD1Q96NT3 240 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms