RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CACNA2D2Q9NY47 1150 aa29.71■■■□□ 2.35
CBX4-202ENST00000448310 PRCPP42785 496 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 MAPK8P45983 427 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 CBWD6Q4V339 395 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 DCAF17Q5H9S7 520 aaPredicted RBP29.7■■■□□ 2.35
CBX4-202ENST00000448310 CBWD3Q5JTY5 395 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 CBWD5Q5RIA9 395 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 TCERG1LQ5VWI1 586 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 PIGZQ86VD9 579 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 ZNF276Q8N554 614 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 GABRG3Q99928 467 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 NUSAP1Q9BXS6 441 aaKnown RBP29.7■■■□□ 2.35
CBX4-202ENST00000448310 FSCN3Q9NQT6 498 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 PILRBQ9UKJ0 227 aa29.7■■■□□ 2.35
CBX4-202ENST00000448310 WASH3PC4AMC7 463 aa29.69■■■□□ 2.34
CBX4-202ENST00000448310 AP5Z1O43299 807 aa29.69■■■□□ 2.34
CBX4-202ENST00000448310 SHC2P98077 582 aa29.69■■■□□ 2.34
CBX4-202ENST00000448310 SPDYCQ5MJ68 293 aa29.69■■■□□ 2.34
CBX4-202ENST00000448310 ARHGAP17Q68EM7 881 aa29.69■■■□□ 2.34
CBX4-202ENST00000448310 CD93Q9NPY3 652 aa29.69■■■□□ 2.34
CBX4-202ENST00000448310 CYP8B1Q9UNU6 501 aa29.69■■■□□ 2.34
CBX4-202ENST00000448310 IGHV1OR15-9A0A0B4J2B8 117 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 STX10O60499 249 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 CFIP05156 583 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 ENGP17813 658 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 CORO1AP31146 461 aaKnown RBP29.68■■■□□ 2.34
CBX4-202ENST00000448310 ZNF252P-AS1Q0IIN9 211 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 LMAN2Q12907 356 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 SLC36A4Q6YBV0 504 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 TTC39CQ8N584 583 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 CCDC34Q96HJ3 373 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 FAXDC2Q96IV6 333 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 CDK5RAP1Q96SZ6 601 aaKnown RBP29.68■■■□□ 2.34
CBX4-202ENST00000448310 FBXO10Q9UK96 956 aa29.68■■■□□ 2.34
CBX4-202ENST00000448310 TULP2O00295 520 aa29.67■■■□□ 2.34
CBX4-202ENST00000448310 ZBTB24O43167 697 aaPredicted RBP29.67■■■□□ 2.34
CBX4-202ENST00000448310 COG7P83436 770 aa29.67■■■□□ 2.34
CBX4-202ENST00000448310 RAB41Q5JT25 222 aa29.67■■■□□ 2.34
CBX4-202ENST00000448310 FYB2Q5VWT5 728 aa29.67■■■□□ 2.34
CBX4-202ENST00000448310 FMR1NBQ8N0W7 255 aaPredicted RBP29.67■■■□□ 2.34
CBX4-202ENST00000448310 NDRG1Q92597 394 aaKnown RBP29.67■■■□□ 2.34
CBX4-202ENST00000448310 ERCC4Q92889 916 aaPredicted RBP29.67■■■□□ 2.34
CBX4-202ENST00000448310 AGO1Q9UL18 857 aaKnown RBP29.67■■■□□ 2.34
CBX4-202ENST00000448310 ZNF510Q9Y2H8 683 aa29.67■■■□□ 2.34
CBX4-202ENST00000448310 PENKP01210 267 aaPredicted RBP29.66■■■□□ 2.34
CBX4-202ENST00000448310 TKTL1P51854 596 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 PMS1P54277 932 aaKnown RBP29.66■■■□□ 2.34
CBX4-202ENST00000448310 YWHAGP61981 247 aaKnown RBP eCLIP29.66■■■□□ 2.34
CBX4-202ENST00000448310 ZNF33AQ06730 810 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 GOLGA7BQ2TAP0 167 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 PEAR1Q5VY43 1037 aaPredicted RBP29.66■■■□□ 2.34
CBX4-202ENST00000448310 SLC23A3Q6PIS1 610 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 RSRC2Q7L4I2 434 aaKnown RBP29.66■■■□□ 2.34
CBX4-202ENST00000448310 DENND1CQ8IV53 801 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 ANKRD52Q8NB46 1076 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 DEFB124Q8NES8 71 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 UBXN6Q9BZV1 441 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 RMND1Q9NWS8 449 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 MARCH2Q9P0N8 246 aa29.66■■■□□ 2.34
CBX4-202ENST00000448310 SLC12A8A0AV02 714 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 CSRP1P21291 193 aaKnown RBP29.65■■■□□ 2.34
CBX4-202ENST00000448310 MFAP3P55082 362 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 FOXC1Q12948 553 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 GEN1Q17RS7 908 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 ZNF658Q5TYW1 1059 aaPredicted RBP29.65■■■□□ 2.34
CBX4-202ENST00000448310 ANKRD40Q6AI12 368 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 SLC41A1Q8IVJ1 513 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 ARHGAP18Q8N392 663 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 MRGPRX1Q96LB2 322 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 TSG101Q99816 390 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 ULBP1Q9BZM6 244 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 DCLK3Q9C098 648 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 STON1Q9Y6Q2 735 aa29.65■■■□□ 2.34
CBX4-202ENST00000448310 PCDH15Q96QU1 1955 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 TRIM49BA6NDI0 452 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 ZNF217O75362 1048 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 CHKAP35790 457 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 DPP6P42658 865 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 PDE4CQ08493 712 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 CUL2Q13617 745 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 KIAA1324Q6UXG2 1013 aaKnown RBP29.64■■■□□ 2.34
CBX4-202ENST00000448310 TSPAN16Q9UKR8 245 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 STRIP2Q9ULQ0 834 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 FRYQ5TBA9 3013 aa29.64■■■□□ 2.34
CBX4-202ENST00000448310 CACNA1EQ15878 2313 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 GFRA2O00451 464 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 SLC16A3O15427 465 aaKnown RBP29.63■■■□□ 2.33
CBX4-202ENST00000448310 ZBED1O96006 694 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 CEACAM1P13688 526 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 SLC8A3P57103 927 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 LRMPQ12912 555 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 BHLHA9Q7RTU4 235 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 ZC3H3Q8IXZ2 948 aaKnown RBP29.63■■■□□ 2.33
CBX4-202ENST00000448310 HSPA12BQ96MM6 686 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 GTPBP2Q9BX10 602 aaKnown RBP29.63■■■□□ 2.33
CBX4-202ENST00000448310 CLEC4EQ9ULY5 219 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 SLC6A14Q9UN76 642 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 SLC27A6Q9Y2P4 619 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 COQ4Q9Y3A0 265 aa29.63■■■□□ 2.33
CBX4-202ENST00000448310 PCNX2A6NKB5 2137 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms