RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 FUKQ8N0W3 1084 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 CCDC185Q8N715 623 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 GBP7Q8N8V2 638 aaPredicted RBP16.88■□□□□ 0.29
OTUB1-204ENST00000447683 MCUQ8NE86 351 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 CSPG4P5Q96PW8 444 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 PPP1R10Q96QC0 940 aaKnown RBP16.88■□□□□ 0.29
OTUB1-204ENST00000447683 MAGEB5Q9BZ81 275 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 ETNK1Q9HBU6 452 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 USP3Q9Y6I4 520 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 TSC2P49815 1807 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 ZNF638Q14966 1978 aaKnown RBP16.88■□□□□ 0.29
OTUB1-204ENST00000447683 COQ9O75208 318 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 AVILO75366 819 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 UBOX5O94941 541 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 CYP2B6P20813 491 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 TAF1CQ15572 869 aaPredicted RBP16.87■□□□□ 0.29
OTUB1-204ENST00000447683 NAIF1Q69YI7 327 aaPredicted RBP16.87■□□□□ 0.29
OTUB1-204ENST00000447683 CAND1Q86VP6 1230 aaKnown RBP16.87■□□□□ 0.29
OTUB1-204ENST00000447683 BANPQ8N9N5 519 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 GABRDO14764 452 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 RGS2P41220 211 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 DNAJC3Q13217 504 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 FSCN1Q16658 493 aaKnown RBP16.87■□□□□ 0.29
OTUB1-204ENST00000447683 SLC25A52Q3SY17 297 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 KBTBD12Q3ZCT8 623 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 SYCP2LQ5T4T6 812 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 HHATQ5VTY9 493 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 TWF2Q6IBS0 349 aaKnown RBP16.87■□□□□ 0.29
OTUB1-204ENST00000447683 LVRNQ6Q4G3 990 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 C17orf99Q6UX52 265 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 PAQR9Q6ZVX9 377 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 BNIPLQ7Z465 357 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 PSTKQ8IV42 348 aaKnown RBP16.87■□□□□ 0.29
OTUB1-204ENST00000447683 DEFB106AQ8N104 65 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 CCDC110Q8TBZ0 833 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 QKIQ96PU8 341 aaKnown RBP eCLIP16.87■□□□□ 0.29
OTUB1-204ENST00000447683 POPDC2Q9HBU9 364 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 KLHL14Q9P2G3 628 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 RCOR3Q9P2K3 495 aaPredicted RBP16.87■□□□□ 0.29
OTUB1-204ENST00000447683 FZD10Q9ULW2 581 aa16.87■□□□□ 0.29
OTUB1-204ENST00000447683 TM9SF1O15321 606 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 DAB1O75553 588 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 GBP2P32456 591 aaPredicted RBP16.86■□□□□ 0.29
OTUB1-204ENST00000447683 MAGEA3P43357 314 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 YWHAGP61981 247 aaKnown RBP eCLIP16.86■□□□□ 0.29
OTUB1-204ENST00000447683 MTA1Q13330 715 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 RBBP5Q15291 538 aaKnown RBP16.86■□□□□ 0.29
OTUB1-204ENST00000447683 FAM182AQ5T1J6 154 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 FAXCQ5TGI0 409 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 NCBP2-AS2Q69YL0 99 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 TAF2Q6P1X5 1199 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 FAM47EQ6ZV65 393 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 KCTD13Q8WZ19 329 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 NT5C3BQ969T7 300 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 LRRC39Q96DD0 335 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 PRDM16Q9HAZ2 1276 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 RXFP1Q9HBX9 757 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 KLC4Q9NSK0 619 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 PHTF1Q9UMS5 762 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 TTLL3Q9Y4R7 772 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 SCN10AQ9Y5Y9 1956 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 IQANK1A0A1B0GTG1 560 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 CYB561D2O14569 222 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 EDF1O60869 148 aaKnown RBP16.86■□□□□ 0.29
OTUB1-204ENST00000447683 NPR3P17342 541 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 PTPN1P18031 435 aaKnown RBP16.86■□□□□ 0.29
OTUB1-204ENST00000447683 TPSB2P20231 275 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 MGAT5Q09328 741 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 ADIGQ0VDE8 80 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 BNIP1Q12981 228 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 TPSAB1Q15661 275 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 FAM133BQ5BKY9 247 aaKnown RBP16.86■□□□□ 0.29
OTUB1-204ENST00000447683 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 LRRC8CQ8TDW0 803 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 SPOCK2Q92563 424 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 N4BP2L2Q92802 583 aaPredicted RBP16.86■□□□□ 0.29
OTUB1-204ENST00000447683 RMDN2Q96LZ7 410 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 APBA2Q99767 749 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 DTLQ9NZJ0 730 aa16.86■□□□□ 0.29
OTUB1-204ENST00000447683 MANSC4A6NHS7 340 aaPredicted RBP16.85■□□□□ 0.29
OTUB1-204ENST00000447683 DGKIO75912 1065 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 FAM155BO75949 473 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 METTL18O95568 372 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 APRTP07741 180 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 GSTA2P09210 222 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 HUNKP57058 714 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 MRPS5P82675 430 aaKnown RBP16.85■□□□□ 0.29
OTUB1-204ENST00000447683 PTK7Q13308 1070 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 OTUD1Q5VV17 481 aaPredicted RBP16.85■□□□□ 0.29
OTUB1-204ENST00000447683 SH2D5Q6ZV89 423 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 RASAL3Q86YV0 1011 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 VPS52Q8N1B4 723 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 ZNF276Q8N554 614 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 FITM2Q8N6M3 262 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 ZNF483Q8TF39 744 aaPredicted RBP16.85■□□□□ 0.29
OTUB1-204ENST00000447683 LRRN4Q8WUT4 740 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 OLFM3Q96PB7 478 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 PLAC1Q9HBJ0 212 aa16.85■□□□□ 0.29
OTUB1-204ENST00000447683 TRDMT1O14717 391 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms