RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 PIDD1Q9HB75 910 aa15.76■□□□□ 0.11
CCNE1-203ENST00000444983 PIGVQ9NUD9 493 aa15.76■□□□□ 0.11
CCNE1-203ENST00000444983 SFMBT1Q9UHJ3 866 aa15.76■□□□□ 0.11
CCNE1-203ENST00000444983 CDH22Q9UJ99 828 aa15.76■□□□□ 0.11
CCNE1-203ENST00000444983 ZNF197O14709 1029 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 FANCGO15287 622 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 IRAK2O43187 625 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 KIF5CO60282 957 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 F9P00740 461 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 TCF4P15884 667 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 CXCR3P49682 368 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 SULT1E1P49888 294 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 ATXN1P54253 815 aaKnown RBP15.75■□□□□ 0.11
CCNE1-203ENST00000444983 CYP4F8P98187 520 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 C10orf120Q5SQS8 335 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 CC2D1AQ6P1N0 951 aaPredicted RBP15.75■□□□□ 0.11
CCNE1-203ENST00000444983 RSRC2Q7L4I2 434 aaKnown RBP15.75■□□□□ 0.11
CCNE1-203ENST00000444983 SYCE1Q8N0S2 351 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 SMRP1Q8NCR6 262 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 MRPS31Q92665 395 aaKnown RBP15.75■□□□□ 0.11
CCNE1-203ENST00000444983 SLC39A13Q96H72 371 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 ZFRQ96KR1 1074 aaKnown RBP15.75■□□□□ 0.11
CCNE1-203ENST00000444983 CYP2S1Q96SQ9 504 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 DNMT3LQ9UJW3 386 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 CLUHO75153 1309 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 DENND4AQ7Z401 1863 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 C5orf42Q9H799 3197 aa15.75■□□□□ 0.11
CCNE1-203ENST00000444983 MDM4O15151 490 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 RNF8O76064 485 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 IGLV3-27P01718 113 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 DDX6P26196 483 aaKnown RBP eCLIP15.74■□□□□ 0.11
CCNE1-203ENST00000444983 MIPP30301 263 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 RDXP35241 583 aaKnown RBP15.74■□□□□ 0.11
CCNE1-203ENST00000444983 TAS2R40P59535 323 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 ZXDBP98169 803 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 SLC25A11Q02978 314 aaKnown RBP15.74■□□□□ 0.11
CCNE1-203ENST00000444983 EFEMP1Q12805 493 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 TEAD2Q15562 447 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 CDO1Q16878 200 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 ITFG1Q8TB96 612 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 UBE2Q2Q8WVN8 375 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 SERPINB11Q96P15 392 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 ALS2CR12Q96Q35 445 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 APOL5Q9BWW9 433 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 TASP1Q9H6P5 420 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 TMEM51Q9NW97 253 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 DDIT4Q9NX09 232 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 MARCH2Q9P0N8 246 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 ZMYM5Q9UJ78 669 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 TLR6Q9Y2C9 796 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 HYOU1Q9Y4L1 999 aa15.74■□□□□ 0.11
CCNE1-203ENST00000444983 ESPNB1AK53 854 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 I6L893 689 aaPredicted RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 MSI1O43347 362 aaKnown RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 FOSL2P15408 326 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 HDCP19113 662 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 IL1R2P27930 398 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 SLC7A9P82251 487 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 RING1Q06587 406 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 ZNF569Q5MCW4 686 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 ATAT1Q5SQI0 421 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 MEI1Q5TIA1 1274 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 SLC35F6Q8N357 371 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 MICALL1Q8N3F8 863 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 MAB21L3Q8N8X9 362 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 HES6Q96HZ4 224 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 GCNAQ96QF7 691 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 WDR24Q96S15 920 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 PEBP4Q96S96 227 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 NCAPGQ9BPX3 1015 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 KLF16Q9BXK1 252 aaPredicted RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 ANLNQ9NQW6 1124 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 MRPS23Q9Y3D9 190 aaKnown RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 HELZP42694 1942 aaKnown RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 TMEM110-MUSTN1A8MSY1 372 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 KCNU1A8MYU2 1149 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 ZNF500O60304 480 aaPredicted RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 CEBPBP17676 345 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 WEE1P30291 646 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 GBP1P32455 592 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 ETF1P62495 437 aaKnown RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 DEUP1Q05D60 604 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 NME3Q13232 169 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 PPP2R5DQ14738 602 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 TRIP4Q15650 581 aaPredicted RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 GPR158Q5T848 1215 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 LRRC38Q5VT99 294 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 TXNRD3NBQ6F5E7 133 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 CES5AQ6NT32 575 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 CMTM8Q8IZV2 173 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 ARL14EPQ8N8R7 260 aaPredicted RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 ADAMTS19Q8TE59 1207 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 SUSD6Q92537 303 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 FCRL2Q96LA5 508 aaPredicted RBP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 ZSWIM3Q96MP5 696 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 FAM204AQ9H8W3 233 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCNE1-203ENST00000444983 USP18Q9UMW8 372 aa15.73■□□□□ 0.11
CCNE1-203ENST00000444983 HBS1LQ9Y450 684 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms