RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 CALCOCO1Q9P1Z2 691 aa19.58■□□□□ 0.73
SEMA3D-202ENST00000444867 LGALS13Q9UHV8 139 aa19.58■□□□□ 0.73
SEMA3D-202ENST00000444867 USP3Q9Y6I4 520 aa19.58■□□□□ 0.73
SEMA3D-202ENST00000444867 SF3B1O75533 1304 aaKnown RBP eCLIP19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 SMIM23A6NLE4 172 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 E7ESA3 106 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 CHADO15335 359 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 LTFP02788 710 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 TSHRP16473 764 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 LSP1P33241 339 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 MMP13P45452 471 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 CACNA2D1P54289 1103 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 GUCY1A3Q02108 690 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 LONRF1Q17RB8 773 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 EFHC2Q5JST6 749 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 CLLU1OSQ5K130 101 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 SYPL2Q5VXT5 272 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 PM20D1Q6GTS8 502 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 HFE2Q6ZVN8 426 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 GPRIN1Q7Z2K8 1008 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 ZNF296Q8WUU4 475 aaPredicted RBP19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 CENPTQ96BT3 561 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 ELAC1Q9H777 363 aaKnown RBP19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 TMEM30AQ9NV96 361 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 TMEM161AQ9NX61 479 aa19.58■□□□□ 0.72
SEMA3D-202ENST00000444867 YJEFN3A6XGL0 299 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 HACD1B0YJ81 288 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 E7ENQ6 273 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 KCNN4O15554 427 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 CDH16O75309 829 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 ZNF189O75820 626 aaPredicted RBP19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 F9P00740 461 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 FYNP06241 537 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 CDK7P50613 346 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 SCAPQ12770 1279 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 PDIA2Q13087 525 aaKnown RBP19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 SLC45A4Q5BKX6 768 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 C4orf50Q6ZRC1 276 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 BEND5Q7L4P6 421 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 HASPINQ8TF76 798 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 NAALADL1Q9UQQ1 740 aa19.57■□□□□ 0.72
SEMA3D-202ENST00000444867 USP17L7P0C7H9 530 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 BDNFP23560 247 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 RBL1P28749 1068 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 SLCO1A2P46721 670 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 ZNF135P52742 658 aaPredicted RBP19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 IFI35P80217 286 aaPredicted RBP19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 BASP1P80723 227 aaKnown RBP19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 YWHAHQ04917 246 aaPredicted RBP19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 RNASELQ05823 741 aaKnown RBP19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 KCNJ11Q14654 390 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 ANKRD22Q5VYY1 191 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 NCBP2-AS2Q69YL0 99 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 COLGALT2Q8IYK4 626 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 ZBED8Q8IZ13 594 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 PDIK1LQ8N165 341 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 OR10T2Q8NGX3 314 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 QKIQ96PU8 341 aaKnown RBP eCLIP19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 EPN3Q9H201 632 aa19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 XPO7Q9UIA9 1087 aaKnown RBP19.56■□□□□ 0.72
SEMA3D-202ENST00000444867 E7EVH7 732 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 DNM1LO00429 736 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 DDHD2O94830 711 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 ITGB1P05556 798 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 GOT1P17174 413 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 MAGEA6P43360 314 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 PITX1P78337 314 aaPredicted RBP19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 TTC19Q6DKK2 380 aaPredicted RBP19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 BHLHA9Q7RTU4 235 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 TDRPQ86YL5 185 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 SLC7A14Q8TBB6 771 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 RNF139Q8WU17 664 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 KLC2Q9H0B6 622 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 PIGVQ9NUD9 493 aa19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 ZMYND8Q9ULU4 1186 aaPredicted RBP19.55■□□□□ 0.72
SEMA3D-202ENST00000444867 TRAPPC3O43617 180 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 GCATO75600 419 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 NCAM1P13591 858 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 AMPD1P23109 780 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 PHBP35232 272 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 ADRA1BP35368 520 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 NME3Q13232 169 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 RASA2Q15283 850 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 ARL13BQ3SXY8 428 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 ZNF280BQ86YH2 543 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 ATP11CQ8NB49 1132 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 FAM193BQ96PV7 902 aaPredicted RBP19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 WDR6Q9NNW5 1121 aaKnown RBP19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 ARHGEF4Q9NR80 690 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 TBC1D13Q9NVG8 400 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 TMLHEQ9NVH6 421 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 FETUBQ9UGM5 382 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 DGKIO75912 1065 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 TMEM63AO94886 807 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 OAZ2O95190 189 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 HCAR3P49019 387 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 GBE1Q04446 702 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 NR1H3Q13133 447 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 FASTKD3Q14CZ7 662 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms