RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 MYLPFQ96A32 169 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 PPWD1Q96BP3 646 aaKnown RBP9.01□□□□□ -0.97
CCDC113-202ENST00000443128 PPP1R36Q96LQ0 422 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 ZFP42Q96MM3 310 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 SERPINI1Q99574 410 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 FTHL17Q9BXU8 183 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 SUDS3Q9H7L9 328 aaPredicted RBP9.01□□□□□ -0.97
CCDC113-202ENST00000443128 ECT2Q9H8V3 914 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 LRRC40Q9H9A6 602 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 TRUB2O95900 331 aaKnown RBP9.01□□□□□ -0.97
CCDC113-202ENST00000443128 AMHP03971 560 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 YBX3P16989 372 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCDC113-202ENST00000443128 MMP8P22894 467 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 RBL1P28749 1068 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 KPNA1P52294 538 aaPredicted RBP9.01□□□□□ -0.97
CCDC113-202ENST00000443128 OXCT1P55809 520 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 PTPN20Q4JDL3 420 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 ANKRD20A8PQ5CZ79 823 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 IFNL1Q8IU54 200 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 ARMC2Q8NEN0 867 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 NT5MQ9NPB1 228 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 SIX2Q9NPC8 291 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 PSD3Q9NYI0 1048 aa9.01□□□□□ -0.97
CCDC113-202ENST00000443128 KIAA0100Q14667 2235 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 ADGRA3Q8IWK6 1321 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 TRIM66O15016 1216 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 NOL3O60936 208 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 CILPO75339 1184 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 FSTL1Q12841 308 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 GRIK3Q13003 919 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 NPNTQ6UXI9 565 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 HIPK4Q8NE63 616 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 DCUN1D1Q96GG9 259 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 SEC16BQ96JE7 1060 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 FAM111AQ96PZ2 611 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 NAT9Q9BTE0 207 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 SNRNP25Q9BV90 132 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 FICDQ9BVA6 458 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 RBM22Q9NW64 420 aaKnown RBP eCLIP9□□□□□ -0.97
CCDC113-202ENST00000443128 SALL4Q9UJQ4 1053 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 COL2A1P02458 1487 aaPredicted RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 NRAPQ86VF7 1730 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 SEPT4O43236 478 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 CCDC22O60826 627 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 ENDOD1O94919 500 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 RTN3O95197 1032 aaPredicted RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 RHOCP08134 193 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 MYL2P10916 166 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 ELK3P41970 407 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 BRCC3P46736 316 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 PRKCZQ05513 592 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 DNAJC3Q13217 504 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 UNC45BQ8IWX7 931 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 TOP6BLQ8N6T0 577 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 DEFB118Q96PH6 123 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 FZD8Q9H461 694 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 OLA1Q9NTK5 396 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 PIH1D1Q9NWS0 290 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 BAG5Q9UL15 447 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 PADI3Q9ULW8 664 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 SLC45A1Q9Y2W3 748 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 RNF103O00237 685 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 ERBB2P04626 1255 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 ETS1P14921 441 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 NUDT18Q6ZVK8 323 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 DDIASQ8IXT1 998 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 TSEN2Q8NCE0 465 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 JOSD2Q8TAC2 188 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 DDI1Q8WTU0 396 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 LHX5Q9H2C1 402 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 CACYBPQ9HB71 228 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 APOBEC3GQ9HC16 384 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 ABCC13Q9NSE7 274 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 SMPD4Q9NXE4 827 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 VPS28Q9UK41 221 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 AKAP11Q9UKA4 1901 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 NAV1Q8NEY1 1877 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 CA12O43570 354 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 FAM107AO95990 144 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 RBBP7Q16576 425 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 IMPG1Q17R60 797 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 KCTD19Q17RG1 926 aaPredicted RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 ZRANB3Q5FWF4 1079 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 ILDR2Q71H61 639 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 CPXM1Q96SM3 734 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 CDK5RAP1Q96SZ6 601 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 TRIM54Q9BYV2 358 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 MANSC1Q9H8J5 431 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 EML4Q9HC35 981 aaKnown RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 PCYOX1Q9UHG3 505 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 AJAP1Q9UKB5 411 aaPredicted RBP9□□□□□ -0.97
CCDC113-202ENST00000443128 COG5Q9UP83 839 aa9□□□□□ -0.97
CCDC113-202ENST00000443128 CBX4O00257 560 aa8.99□□□□□ -0.97
CCDC113-202ENST00000443128 MEFVO15553 781 aaPredicted RBP8.99□□□□□ -0.97
CCDC113-202ENST00000443128 LIASO43766 372 aa8.99□□□□□ -0.97
CCDC113-202ENST00000443128 OPHN1O60890 802 aa8.99□□□□□ -0.97
CCDC113-202ENST00000443128 AKT1P31749 480 aa8.99□□□□□ -0.97
CCDC113-202ENST00000443128 ALDH18A1P54886 795 aaKnown RBP8.99□□□□□ -0.97
CCDC113-202ENST00000443128 MMRN1Q13201 1228 aa8.99□□□□□ -0.97
CCDC113-202ENST00000443128 ARHGEF7Q14155 803 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms